☆29Aug 11, 2026Updated this week
Alternatives and similar repositories for SpaMTP
Users that are interested in SpaMTP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Aug 17, 2023Updated 2 years ago
- Create .mzML files through the R Console☆12Jun 14, 2026Updated last month
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆50Aug 18, 2025Updated 11 months ago
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆16Updated this week
- CRCmapper: map core regulatory circuitry☆14Nov 23, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆16Sep 29, 2023Updated 2 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Apr 15, 2025Updated last year
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated last year
- Framework for analysis of cell-types and Ligand-Receptor cooccurrences☆21Feb 13, 2023Updated 3 years ago
- ☆28Jun 4, 2023Updated 3 years ago
- ☆17Apr 9, 2025Updated last year
- This site contains datasets and R codes for the regression book (in Vietnamese)☆15Oct 16, 2021Updated 4 years ago
- ☆12May 24, 2024Updated 2 years ago
- ☆13Sep 30, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- R package of CSOmap(developing☆13Mar 22, 2022Updated 4 years ago
- Toolbox of the Human Neural Organoid Cell Atlas☆35Updated this week
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆13Jan 10, 2024Updated 2 years ago
- Detecting and dissecting anomalous anatomic regions in spatial transcriptomics with STANDS☆11May 18, 2026Updated 2 months ago
- This site contains all datasets for the book 'Phân tích dữ liệu với R' (Nxb Tổng Hợp, 2016).☆15Nov 8, 2021Updated 4 years ago
- Single Cell Analysis Operations☆17Jun 24, 2026Updated last month
- LARIS enables accurate and efficient ligand and receptor interaction analysis in spatial transcriptomics☆16Feb 26, 2026Updated 5 months ago
- R-based access to Mass-Spectrometry data☆25Sep 17, 2025Updated 10 months ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆17Aug 1, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆18Apr 15, 2025Updated last year
- ☆55Dec 5, 2024Updated last year
- ☆17Sep 13, 2024Updated last year
- fastCNV R package to detect putative CNVs in single cell and spatial transcriptomics data☆51Jul 9, 2026Updated last month
- Vignettes for Cardinal3 paper☆10Feb 20, 2023Updated 3 years ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Jul 2, 2024Updated 2 years ago
- ☆35Jun 15, 2026Updated last month
- ☆63Jul 23, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Webpage of the "Introduction to RNA-Seq: From quality control to pathway analysis - streamed" SIB course.☆16Jul 14, 2026Updated 3 weeks ago
- Peak caller for CUT&TAG data☆31Aug 18, 2022Updated 3 years ago
- Quantifying metabolism activity at the single-cell resolution☆190Feb 18, 2026Updated 5 months ago
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆79Jan 17, 2025Updated last year
- ☆72Sep 16, 2025Updated 10 months ago
- A unified framework for identifying multicellular niches and niche-regulated cell states from spatial transcriptomics data.☆17Aug 3, 2026Updated last week
- Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…☆21Jul 7, 2022Updated 4 years ago