cantinilab / scPRINT-old1Links
Single Cell Pretrained Regulatory network INference from Transcripts
☆11Updated last year
Alternatives and similar repositories for scPRINT-old1
Users that are interested in scPRINT-old1 are comparing it to the libraries listed below
Sorting:
- ☆15Updated 2 years ago
- Generation of disentangled microenvironment-induced and intrinsic gene expression vectors from spatial transcriptomics data☆20Updated 2 months ago
- A single-cell analysis toolkit to jointly analyze samples from distinct conditions☆34Updated 7 months ago
- Python playground for cell-type-specific biology☆12Updated last week
- Learning motif contributions to cell transitions using sequence features and graphs.☆28Updated last year
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 8 months ago
- ☆29Updated 4 months ago
- Molecular interactions inference from single-cell multi-omics data☆27Updated 2 weeks ago
- Gene regulatory network inference for RNA velocity and pseudotime data☆27Updated last month
- ☆13Updated 2 months ago
- Learning meaningful representations of genes☆19Updated 4 months ago
- Projecting RNA measurements onto single cell atlases to extract cell type-specific expression profiles using scProjection☆16Updated 2 years ago
- ☆17Updated last year
- ☆26Updated 5 months ago
- tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.☆11Updated last year
- Code and example of the D-SPIN framework☆24Updated last week
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Updated 2 years ago
- ☆16Updated last year
- ☆18Updated 4 years ago
- ☆12Updated 2 years ago
- ☆13Updated last year
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated last month
- Information-based dimensionality reduction☆29Updated 10 months ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆11Updated last year
- ☆61Updated last year
- ☆11Updated 2 years ago
- ☆17Updated last year
- Parse ArchR arrow files to anndata h5ad☆15Updated last year