WCSCourses / SingleCell_23
Hands-on training on the latest methodologies and applications for the analysis of nucleic acids from eukaryotic single cells
☆16Updated 8 months ago
Alternatives and similar repositories for SingleCell_23:
Users that are interested in SingleCell_23 are comparing it to the libraries listed below
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …☆45Updated last month
- ☆30Updated 3 months ago
- ☆61Updated last year
- ☆27Updated 6 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- ☆37Updated 3 years ago
- Functional Inference of Gene Regulation☆43Updated 9 months ago
- ☆54Updated 4 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆45Updated last year
- ☆21Updated 5 years ago
- R implementation of MULTI-seq sample classification workflow☆62Updated last year
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 2 years ago
- R package for robust clustering of single cell RNA sequencing data☆35Updated last year
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated 2 years ago
- Framework for sensitive DE testing (using neighbourhoods)☆64Updated 9 months ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆26Updated this week
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆44Updated last year
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated last month
- ☆29Updated 2 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- scWGCNA☆59Updated 2 years ago
- ☆11Updated 9 months ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆74Updated last year
- ☆57Updated 4 years ago
- Capybara: A computational tool to measure cell identity and fate transitions☆58Updated 2 years ago
- SciLifeLab SIB Summer School for Advanced topics in Single Cell Omics. Site: https://nbisweden.github.io/single-cell_sib_scilifelab_2021/☆23Updated 3 years ago
- A unified interface to spatial transcriptomics deconvolution tools☆41Updated last week