marcellszi / rna3dbLinks
A dataset for training and benchmarking deep learning models for RNA structure prediction
☆56Updated 6 months ago
Alternatives and similar repositories for rna3db
Users that are interested in rna3db are comparing it to the libraries listed below
Sorting:
- RNA Multiple Sequence Alignment☆42Updated last year
- ☆35Updated last year
- Efficient implementatin of ESM family.☆56Updated 4 months ago
- Code for humanization of antibody and nanobody☆42Updated 6 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆62Updated last year
- ☆64Updated 3 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆31Updated 2 months ago
- ☆68Updated 4 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆58Updated 7 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆75Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆62Updated 4 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆66Updated 10 months ago
- ☆95Updated 3 weeks ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆59Updated 2 months ago
- Fitness landscapes for antibodies☆73Updated 5 months ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated last month
- ☆152Updated 2 weeks ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆33Updated last month
- ☆60Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆56Updated last month
- Convenience Python APIs for antibody numbering using ANARCI☆96Updated last month
- ☆41Updated 5 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated this week
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆48Updated 2 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆29Updated 10 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- AlphaBind code + model accompanying pre-print☆56Updated 6 months ago
- Protein folding in Pymol☆109Updated 5 months ago
- Machine learning models for antibody sequences in PyTorch☆39Updated 4 years ago