marcellszi / rna3dbLinks
A dataset for training and benchmarking deep learning models for RNA structure prediction
☆56Updated 7 months ago
Alternatives and similar repositories for rna3db
Users that are interested in rna3db are comparing it to the libraries listed below
Sorting:
- ☆66Updated 3 years ago
- ☆69Updated 4 years ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆63Updated last year
- Fitness landscapes for antibodies☆72Updated 6 months ago
- Efficient implementatin of ESM family.☆58Updated 5 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 3 weeks ago
- ☆86Updated 2 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆114Updated 4 months ago
- Tool for modelling the CDRs of antibodies☆49Updated 2 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆40Updated last week
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆61Updated 7 months ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- ☆39Updated last month
- Convenience Python APIs for antibody numbering using ANARCI☆99Updated last month
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆62Updated 5 months ago
- ☆60Updated last year
- ☆35Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆67Updated 10 months ago
- Antibody-specific masked language model☆57Updated 2 years ago
- ☆100Updated last month
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated last month
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆60Updated 2 weeks ago
- Protein folding in Pymol☆109Updated 6 months ago
- open source code for Tencent tFold☆104Updated 4 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆35Updated 2 months ago
- Aligning protein generative models with experimental fitness☆99Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 5 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆63Updated 3 months ago