uw-ipd / RoseTTAFold2NA

Related projects ⓘ

Alternatives and complementary repositories for RoseTTAFold2NA

• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆265Updated 3 weeks ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆328Updated last year
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆319Updated 4 months ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆296Updated last week
• nrbennet / dl_binder_design
  ☆248Updated 3 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆245Updated last year
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆239Updated 2 weeks ago
• biolists / folding_tools
  A collection of *fold* tools
  ☆289Updated 2 months ago
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆623Updated 3 weeks ago
• dauparas / LigandMPNN
  ☆233Updated 5 months ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆242Updated 9 months ago
• uw-ipd / RoseTTAFold2
  ☆175Updated this week
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆281Updated last year
• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆267Updated 7 months ago
• microsoft / protein-sequence-models
  ☆228Updated 3 months ago
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆492Updated 3 months ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆175Updated last year
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆609Updated 2 weeks ago
• KosinskiLab / AlphaPulldown
  ☆218Updated this week
• bjornwallner / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆224Updated 2 months ago
• Zuricho / ParallelFold
  Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…
  ☆147Updated 8 months ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆147Updated last year
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆184Updated last month
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆150Updated 2 months ago
• gjoni / trDesign
  trRosetta for protein design
  ☆172Updated 3 years ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆205Updated 3 months ago
• gjoni / trRosetta
  A package to predict protein inter-residue geometries from sequence data
  ☆206Updated 3 years ago
• lightdock / lightdock
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆307Updated 10 months ago
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆152Updated 2 months ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆188Updated 6 months ago