lijunRNA / RNA3DCNN
to assess structural quality of RNA using 3D CNN
☆13Updated 6 years ago
Alternatives and similar repositories for RNA3DCNN:
Users that are interested in RNA3DCNN are comparing it to the libraries listed below
- Computer aided proximal decaging as a universal strategy for temporal protein activation☆22Updated 5 years ago
- Fraction of Common Contacts Clustering Algorithm for Protein Structures☆26Updated 3 years ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- PyDock Tutorial☆30Updated 6 years ago
- Generates consistent PSSM and/or PDB files for protein-protein complexes☆19Updated 2 years ago
- ☆25Updated 6 months ago
- ☆13Updated 7 years ago
- Some Rosetta Scripts that allow for various simple tasks☆13Updated 5 years ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆39Updated last year
- FebRNA: an automated fragment-ensemble-based model for building RNA 3D structures.☆8Updated last year
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Updated 3 years ago
- De novo design of small molecule binding sites into proteins☆13Updated 3 years ago
- Making Protein folding accessible to all!☆21Updated last year
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆29Updated 10 months ago
- ☆19Updated 2 years ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆32Updated 9 months ago
- RosettaDesign using PyRosetta☆30Updated 5 years ago
- ☆9Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆26Updated 10 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- DLPacker☆29Updated 5 months ago
- DeepDom is an ab-initio method for protein domain boundary prediction☆15Updated 2 years ago
- a universal framework for computational protein design☆35Updated last year
- Automated construction of protein chimeras and their analysis.☆14Updated last year
- ☆20Updated 2 years ago
- An accurate and efficient protein sequence design approach☆22Updated last year
- iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machi…☆28Updated 2 years ago
- Protein-protein binding affinity benchmark☆13Updated last week
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆16Updated 3 years ago