Alternatives and similar repositories for DRfold

Users that are interested in DRfold are comparing it to the libraries listed below

• wengong-jin / abdockgen
  ☆106Updated 2 years ago
• wengong-jin / DSMBind
  ☆92Updated 9 months ago
• DeepGraphLearning / DiffPack
  Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing
  ☆89Updated last year
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆80Updated last year
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆47Updated last year
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆92Updated 8 months ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆98Updated last year
• TencentAI4S / IgGM
  [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design
  ☆75Updated 2 months ago
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆114Updated 5 months ago
• lujiarui / Str2Str
  Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)
  ☆77Updated last year
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 4 years ago
• levinthal / Pallatom
  ☆105Updated 2 months ago
• anton-bushuiev / PPIformer
  Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)
  ☆45Updated 6 months ago
• richardshuai / fampnn
  Sidechain conditioning and modeling for full-atom protein sequence design
  ☆114Updated last month
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆49Updated last year
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆136Updated last month
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆108Updated 9 months ago
• alexechu / protpardelle
  ☆65Updated last year
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆42Updated 8 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• jproney / AF2Rank
  ☆110Updated 2 years ago
• luost26 / RDE-PPI
  Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)
  ☆58Updated last year
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆63Updated 2 months ago
• EureKaZhu / DiffAffinity
  Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)
  ☆36Updated last year
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆26Updated 2 years ago
• tiantz17 / PocketAnchor
  Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction
  ☆34Updated last year
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆64Updated last year
• Barabasi-Lab / AI-Bind
  Interpretable AI pipeline improving binding predictions for novel protein targets and ligands
  ☆39Updated last year
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated last year
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆82Updated last month