RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching
☆81Aug 11, 2024Updated last year
Alternatives and similar repositories for rnaflow
Users that are interested in rnaflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆95Oct 15, 2025Updated 5 months ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆52Nov 17, 2024Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆63Feb 12, 2026Updated last month
- ☆221Mar 2, 2024Updated 2 years ago
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆60May 6, 2024Updated last year
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆291Dec 16, 2025Updated 3 months ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆222May 29, 2025Updated 9 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆103May 25, 2025Updated 9 months ago
- ☆135Jun 3, 2025Updated 9 months ago
- ☆15Jan 27, 2025Updated last year
- Nature Methods: RNA foundation model (together with RhoFold)☆360May 27, 2025Updated 9 months ago
- ☆19Nov 28, 2025Updated 3 months ago
- RiboNucleic Acid (RNA) Language Model☆159Oct 3, 2025Updated 5 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Energy-guided binder design pipeline built on BindCraft☆17Jun 6, 2025Updated 9 months ago
- Diffusion-based all-atom protein generative model.☆233Aug 27, 2025Updated 6 months ago
- Rapid structure-based virtual screening for RNA targets.☆28Mar 6, 2026Updated 2 weeks ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆56Nov 8, 2024Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆415Jul 3, 2023Updated 2 years ago
- ☆16May 22, 2025Updated 10 months ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆72Jul 19, 2024Updated last year
- ☆11Aug 26, 2024Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆66Jul 17, 2024Updated last year
- RoseTTAFold2 protein/nucleic acid complex prediction☆379Jun 3, 2024Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆37Nov 7, 2024Updated last year
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated 11 months ago
- A cyclic peptide-protein complex dataset derived from AFDB.☆38Mar 17, 2026Updated last week
- Fast protein backbone generation with SE(3) flow matching.☆319Jul 19, 2024Updated last year
- Aligning protein generative models with experimental fitness☆120Mar 12, 2026Updated last week
- Single-sequence protein-RNA complex structure prediction with biological language models☆16Sep 23, 2025Updated 6 months ago
- Public RFDiffusionAA repo☆472Jul 9, 2024Updated last year
- ☆97Oct 15, 2024Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Jul 29, 2024Updated last year
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆278Dec 10, 2024Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆109Apr 16, 2025Updated 11 months ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆129Nov 19, 2025Updated 4 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆330Oct 28, 2024Updated last year
- ☆133May 7, 2024Updated last year