RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching
☆83Aug 11, 2024Updated last year
Alternatives and similar repositories for rnaflow
Users that are interested in rnaflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆100Oct 15, 2025Updated 8 months ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆56Nov 17, 2024Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆67May 8, 2026Updated last month
- ☆231Mar 2, 2024Updated 2 years ago
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆59May 6, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆309Dec 16, 2025Updated 6 months ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆241May 29, 2025Updated last year
- Nature Methods: RNA foundation model (together with RhoFold)☆383May 27, 2025Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆107May 25, 2025Updated last year
- ☆142Jun 3, 2025Updated last year
- ☆15Jan 27, 2025Updated last year
- ☆24Nov 28, 2025Updated 7 months ago
- Implementation of Invariant Point Attention, used for coordinate refinement in the structure module of Alphafold2, as a standalone Pytorc…☆171Nov 25, 2022Updated 3 years ago
- RiboNucleic Acid (RNA) Language Model☆169May 4, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Energy-guided binder design pipeline built on BindCraft☆18Jun 6, 2025Updated last year
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 10 months ago
- Rapid structure-based virtual screening for RNA targets.☆29Apr 22, 2026Updated 2 months ago
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆64Nov 8, 2024Updated last year
- ☆17May 22, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆423Jul 3, 2023Updated 3 years ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆74May 20, 2026Updated last month
- ☆12Aug 26, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RoseTTAFold2 protein/nucleic acid complex prediction☆378Jun 3, 2024Updated 2 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆70Jun 16, 2026Updated 2 weeks ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- A cyclic peptide-protein complex dataset derived from AFDB.☆57Mar 17, 2026Updated 3 months ago
- Fast protein backbone generation with SE(3) flow matching.☆326Jul 19, 2024Updated last year
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 3 months ago
- Single-sequence protein-RNA complex structure prediction with biological language models☆17Sep 23, 2025Updated 9 months ago
- ☆100Oct 15, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Public RFDiffusionAA repo☆483Jul 9, 2024Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆101Jul 29, 2024Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆125Apr 16, 2025Updated last year
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆291Dec 10, 2024Updated last year
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆132Nov 19, 2025Updated 7 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion