RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching
☆83Aug 11, 2024Updated last year
Alternatives and similar repositories for rnaflow
Users that are interested in rnaflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design☆99Oct 15, 2025Updated 7 months ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆55Nov 17, 2024Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65May 8, 2026Updated 2 weeks ago
- ☆224Mar 2, 2024Updated 2 years ago
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆60May 6, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆301Dec 16, 2025Updated 5 months ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆231May 29, 2025Updated 11 months ago
- Nature Methods: RNA foundation model (together with RhoFold)☆372May 27, 2025Updated 11 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆105May 25, 2025Updated 11 months ago
- ☆138Jun 3, 2025Updated 11 months ago
- ☆15Jan 27, 2025Updated last year
- ☆23Nov 28, 2025Updated 5 months ago
- Implementation of Invariant Point Attention, used for coordinate refinement in the structure module of Alphafold2, as a standalone Pytorc…☆171Nov 25, 2022Updated 3 years ago
- RiboNucleic Acid (RNA) Language Model☆162May 4, 2026Updated 2 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Energy-guided binder design pipeline built on BindCraft☆18Jun 6, 2025Updated 11 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 8 months ago
- Rapid structure-based virtual screening for RNA targets.☆28Apr 22, 2026Updated last month
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆63Nov 8, 2024Updated last year
- ☆16May 22, 2025Updated last year
- Implementation for SE(3) diffusion model with application to protein backbone generation☆421Jul 3, 2023Updated 2 years ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆73Updated this week
- ☆12Aug 26, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆67Jul 17, 2024Updated last year
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆38Nov 7, 2024Updated last year
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- A cyclic peptide-protein complex dataset derived from AFDB.☆43Mar 17, 2026Updated 2 months ago
- Fast protein backbone generation with SE(3) flow matching.☆328Jul 19, 2024Updated last year
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 2 months ago
- Single-sequence protein-RNA complex structure prediction with biological language models☆16Sep 23, 2025Updated 8 months ago
- ☆100Oct 15, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆99Jul 29, 2024Updated last year
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆111Apr 16, 2025Updated last year
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆286Dec 10, 2024Updated last year
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆130Nov 19, 2025Updated 6 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆334Oct 28, 2024Updated last year