Alternatives and similar repositories for mdCATH:

Users that are interested in mdCATH are comparing it to the libraries listed below

• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆52Updated 2 months ago
• ShenLab / SeqDance
  code for SeqDance, a biophysics-informed protein language model
  ☆22Updated 3 months ago
• anton-bushuiev / PPIformer
  Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)
  ☆47Updated last month
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆32Updated 8 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆31Updated 3 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆41Updated 2 months ago
• feiglab / idpgan
  ☆45Updated last month
• LDeng0205 / confidence-bootstrapping
  Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.
  ☆27Updated 11 months ago
• dakpinaroglu / Frame2seq
  Structure-conditioned masked language modeling for protein sequence design
  ☆61Updated last year
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆33Updated 5 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆26Updated 2 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆31Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆29Updated 2 months ago
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆41Updated 2 months ago
• shuyana / DiffusionProteinLigand
  ☆78Updated 11 months ago
• lujiarui / esmdiff
  ☆39Updated 2 months ago
• huhlim / alphafold-multistate
  ☆34Updated 10 months ago
• lujiarui / Str2Str
  Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)
  ☆71Updated 11 months ago
• LeiLiLab / EnzyGen
  ☆30Updated 3 weeks ago
• HannesStark / CodonMPNN
  ☆24Updated 2 months ago
• kirjner / GGS
  This repository implements Gibbs sampling with Graph-based Smoothing
  ☆37Updated 8 months ago
• Graylab / DFMDock
  DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.
  ☆38Updated 3 weeks ago
• karma211225 / KarmaLoop
  Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop
  ☆11Updated 8 months ago
• Junjie-Zhu / IDPFold
  IDPFold test version
  ☆17Updated 5 months ago
• A4Bio / FoldToken_open
  ☆13Updated 3 months ago
• bzho3923 / CPDiffusion
  ☆20Updated 4 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆24Updated last month