cgoliver / rnaglibLinks
Toolkit for structure-based deep learning on RNA.
☆44Updated 2 months ago
Alternatives and similar repositories for rnaglib
Users that are interested in rnaglib are comparing it to the libraries listed below
Sorting:
- The Enhanced Database of Interacting Protein Structures for Interface Prediction☆52Updated 4 months ago
- Intrinsic-Extrinsic Convolution and Pooling for Learning on 3D Protein Structures☆48Updated 3 years ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆34Updated last year
- A 3D-equivariant neural network for protein structure accuracy estimation☆20Updated 2 years ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆51Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- ☆34Updated last year
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆47Updated 2 years ago
- Graph Denoising Diffusion for Inverse Protein Folding(NeurIPS 2023)☆69Updated last year
- ☆51Updated last year
- This repository implements Gibbs sampling with Graph-based Smoothing☆41Updated last year
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- Official repository of ReactZyme☆39Updated last year
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆49Updated 2 years ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆79Updated last year
- Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)☆42Updated 2 years ago
- ☆35Updated last month
- ☆20Updated last year
- dMaSIF implementation for google colab☆36Updated 2 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆50Updated last month
- ☆17Updated 2 years ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆27Updated last year
- ☆54Updated last year
- ☆73Updated last year
- ☆34Updated 2 years ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆124Updated 10 months ago
- Scalable Deep Learning for RNA Secondary Structure Prediction☆40Updated 3 months ago
- ☆54Updated 5 months ago
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆58Updated last year
- A benchmark for comprehensive evaluation on protein structure tokenization methods☆40Updated 5 months ago