mmagnus / rna-toolsLinks
π§rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online
β178Updated 2 months ago
Alternatives and similar repositories for rna-tools
Users that are interested in rna-tools are comparing it to the libraries listed below
Sorting:
- Inference of couplings in proteins and RNAs from sequence variationβ113Updated 2 years ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteinsβ159Updated 5 months ago
- Evolutionary couplings from protein and RNA sequence alignmentsβ282Updated last month
- Fast protein structure searching or your money backβ114Updated last week
- Install alphafold on the local machine, get out of docker.β104Updated 3 years ago
- MMseqs2 app to run on your workstation or serversβ97Updated 3 weeks ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).β114Updated last year
- Application to assign secondary structure to proteinsβ218Updated 3 weeks ago
- Antibody Numbering and Antigen Receptor ClassIficationβ237Updated last year
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.β164Updated last year
- Multiple Protein Structure Alignment at Scale with FoldMasonβ190Updated this week
- Bilingual Language Model for Protein Sequence and Structureβ270Updated 9 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictionsβ163Updated last year
- Evolutionary velocity with protein language modelsβ94Updated last year
- Compressing protein structures effectively with torsion anglesβ179Updated 2 months ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.β119Updated 2 years ago
- An ultra-high-performance protein-protein docking for heterogeneous supercomputersβ65Updated last year
- β35Updated last year
- β107Updated last year
- Efficient evolution from protein language modelsβ215Updated 2 years ago
- Mutation effects predicted from sequence co-variationβ69Updated 8 years ago
- Convenience Python APIs for antibody numbering using ANARCIβ105Updated 4 months ago
- Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.β110Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learningβ90Updated last year
- Physicochemical properties, indices and descriptors for amino-acid sequences.β104Updated last month
- Direct coupling analysis software for protein and RNA sequencesβ52Updated 2 months ago
- Code for ColabDock paperβ148Updated 5 months ago
- Geometric deep learning of proteinβDNA binding specificityβ75Updated 6 months ago
- Official repo of the modular BioExcel version of HADDOCKβ194Updated last week
- Neural Networks for Protein Sequence Alignmentβ128Updated 10 months ago