Alternatives and similar repositories for rna-tools

Users that are interested in rna-tools are comparing it to the libraries listed below

• debbiemarkslab / plmc
  Inference of couplings in proteins and RNAs from sequence variation
  ☆109Updated 2 years ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆105Updated 11 months ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆151Updated 2 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆99Updated 3 months ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆221Updated last year
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆163Updated 10 months ago
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆272Updated 4 months ago
• steineggerlab / foldmason
  Multiple Protein Structure Alignment at Scale with FoldMason
  ☆181Updated last week
• phbradley / TCRdock
  python tools for TCR:peptide-MHC modeling and analysis
  ☆79Updated last year
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆101Updated 3 years ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆210Updated last year
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆152Updated last year
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆113Updated last year
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆141Updated 2 months ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆108Updated 3 months ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆99Updated last month
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆202Updated last month
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆89Updated last year
• mattarnoldbio / alphapickle
  ☆33Updated last year
• KosinskiLab / AlphaPulldown
  ☆281Updated last week
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆144Updated 5 months ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆171Updated this week
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆256Updated 6 months ago
• jcheongs / alphafold-multimer
  ☆31Updated 3 years ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆87Updated last week
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆174Updated last week
• ncbi / SSDraw
  ☆85Updated last year
• robpearc / DeepFoldRNA
  ☆35Updated last year
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆66Updated 7 years ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago