Python implementation of the FR3D software for searching and annotating RNA 3D structures
☆24Jun 29, 2026Updated this week
Alternatives and similar repositories for fr3d-python
Users that are interested in fr3d-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python library containing RNA-related bioinformatics functions and classes.☆23Updated this week
- Template-based RNA secondary structure visualization☆29Nov 20, 2024Updated last year
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆58Mar 20, 2024Updated 2 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆66May 8, 2026Updated last month
- Very flexible tools for plotting and analyzing all kinds of RNA structure data☆16Jun 2, 2026Updated 3 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆21Jul 16, 2024Updated last year
- Centroid RNA package☆20Oct 12, 2020Updated 5 years ago
- RNA secondary structure prediction tool☆20Jun 20, 2026Updated last week
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- Semiautomated layout of RNA tertiary structure diagrams☆16Feb 26, 2025Updated last year
- ☆36Jan 14, 2025Updated last year
- Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/arch…☆11Apr 6, 2023Updated 3 years ago
- Simulation code for the prediction of RNA structures.☆14Jan 21, 2025Updated last year
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆17Jun 17, 2026Updated last week
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆309Dec 16, 2025Updated 6 months ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Apr 8, 2026Updated 2 months ago
- Toolkit for structure-based deep learning on RNA.☆47Jun 19, 2026Updated last week
- ☆20Oct 18, 2024Updated last year
- Draw RNA secondary structures in python.☆54Jun 24, 2025Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆69Jun 16, 2026Updated last week
- QRNAS: Quick Refinement of Nucleic Acid Structures☆18Apr 30, 2025Updated last year