Python implementation of the FR3D software for searching and annotating RNA 3D structures
☆24May 20, 2026Updated 3 weeks ago
Alternatives and similar repositories for fr3d-python
Users that are interested in fr3d-python are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Python library containing RNA-related bioinformatics functions and classes.☆22Updated this week
- Template-based RNA secondary structure visualization☆29Nov 20, 2024Updated last year
- awesome tools for RNA☆17Nov 15, 2022Updated 3 years ago
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆57Mar 20, 2024Updated 2 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65May 8, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Very flexible tools for plotting and analyzing all kinds of RNA structure data☆16Jun 2, 2026Updated last week
- ☆21Jul 16, 2024Updated last year
- Centroid RNA package☆20Oct 12, 2020Updated 5 years ago
- RNA secondary structure prediction tool☆20May 28, 2026Updated last week
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- Semiautomated layout of RNA tertiary structure diagrams☆15Feb 26, 2025Updated last year
- Curated structures submitted to the RNA-Puzzles experiment. Download as a zip file https://github.com/mmagnus/RNA-Puzzles-submission/arch…☆10Apr 6, 2023Updated 3 years ago
- Simulation code for the prediction of RNA structures.☆13Jan 21, 2025Updated last year
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Jan 29, 2026Updated 4 months ago
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆304Dec 16, 2025Updated 5 months ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆186Apr 8, 2026Updated 2 months ago
- Toolkit for structure-based deep learning on RNA.☆47May 13, 2026Updated 3 weeks ago
- Rapid mining of RNA structure motifs from profiling data.☆14Oct 20, 2021Updated 4 years ago
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- ☆20Oct 18, 2024Updated last year
- Draw RNA secondary structures in python.☆52Jun 24, 2025Updated 11 months ago
- ☆23Jul 21, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A platform to do RNA science☆28Mar 7, 2021Updated 5 years ago
- An analysis of a new experimentally-derived nucleic acid binding chemical library☆31Jan 27, 2023Updated 3 years ago
- ☆53Nov 14, 2025Updated 6 months ago
- AngularJS filters wrapping the 'humanize' library☆10Jul 30, 2015Updated 10 years ago
- A set of processes/pipelines for bioinformatics☆15May 14, 2026Updated 3 weeks ago
- Official repository for the paper "Partition and Code: learning how to compress graphs" (NeurIPS'21) https://arxiv.org/abs/2107.01952☆36Oct 26, 2021Updated 4 years ago
- Twitter retrosynthesis bot☆13Jul 10, 2022Updated 3 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆84May 29, 2026Updated last week
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- JavaScript Sequence Alignment Viewer☆11Mar 25, 2022Updated 4 years ago
- genvenn is a D3js project to visualise list/set data comparisons with standard symmetric venn diagrams. The project is aimed at providing…☆12Jun 28, 2017Updated 8 years ago
- init commit☆17Oct 31, 2023Updated 2 years ago
- Deconvolution of RNA Alternative COnformations☆15Updated this week
- With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...☆177Nov 24, 2023Updated 2 years ago
- RNA-Seq pipeline☆36Jul 22, 2015Updated 10 years ago
- rnalib: a python-based transcriptomics library☆11Jan 23, 2026Updated 4 months ago