Alternatives and similar repositories for fr3d-python:

Users that are interested in fr3d-python are comparing it to the libraries listed below

• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆37Updated last year
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆34Updated last year
• GodzikLab / FATCAT-dist
  ☆15Updated 2 years ago
• labstructbioinf / pLM-BLAST
  Detection of remote homology by comparison of protein language model representations
  ☆50Updated 4 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆27Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆36Updated 6 months ago
• JudeWells / chainsaw
  ☆38Updated 6 months ago
• Doudna-lab / GARNET_DL
  ☆36Updated 3 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆27Updated last year
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆29Updated last month
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆37Updated last year
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆42Updated 3 months ago
• SNU-CSSB / RF2-Lite
  ☆26Updated 10 months ago
• proteinphysiologylab / frustratometeR
  ☆35Updated 6 months ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆32Updated 2 years ago
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆24Updated 3 years ago
• Faezov / PDBrenum
  ☆28Updated 11 months ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆33Updated 3 weeks ago
• sokrypton / seqmodels
  ☆31Updated 4 years ago
• psipred / ted-tools
  ML toolset for creating TED: The Encyclopedia of Domains
  ☆17Updated last month
• RNA-Puzzles / RNA_assessment
  Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…
  ☆21Updated 4 months ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆58Updated 4 years ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆32Updated last week
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆53Updated 2 weeks ago
• labstructbioinf / PiPred
  Deep learning based prediction of pi-helices in protein sequences
  ☆10Updated 2 years ago
• swanss / peptide_design
  This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"
  ☆16Updated last year
• AndersJing / RaptorX-Single
  ☆20Updated 11 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆31Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆41Updated 2 years ago