☆38Dec 15, 2023Updated 2 years ago
Alternatives and similar repositories for DeepFoldRNA
Users that are interested in DeepFoldRNA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- to assess structural quality of RNA using 3D CNN☆14Aug 17, 2018Updated 7 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65Apr 3, 2026Updated 3 weeks ago
- RNA Multiple Sequence Alignment☆51Jul 20, 2023Updated 2 years ago
- ☆43Oct 1, 2023Updated 2 years ago
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆20Apr 3, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆67Jul 17, 2024Updated last year
- Integer programming based prediction of RNA secondary structures with pseudoknots☆23Nov 30, 2025Updated 5 months ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆186Apr 8, 2026Updated 3 weeks ago
- material related to the genetech courses☆10Sep 11, 2023Updated 2 years ago
- RiboNN: predicting translation efficiencies from mRNA sequences☆55Jan 12, 2026Updated 3 months ago
- ☆13Oct 19, 2023Updated 2 years ago
- ☆13Dec 6, 2022Updated 3 years ago
- ☆15Feb 18, 2025Updated last year
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- RNA Structural Covariation Above Phylogenetic Expectation☆19Dec 12, 2025Updated 4 months ago
- Source code for "A universal framework for accurate and efficient geometric deep learning of molecular systems" (Nature Scientific Report…☆71Nov 12, 2025Updated 5 months ago
- Improved ab initio protein structure reconstruction☆15Mar 7, 2018Updated 8 years ago
- Contrastive learning of protein representations with graph neural networks for structural and functional annotations☆11Apr 23, 2023Updated 3 years ago
- S2F: protein function without experiments☆16Nov 24, 2025Updated 5 months ago
- ARES implement in PyTorch☆16Feb 27, 2024Updated 2 years ago
- ☆12Feb 7, 2023Updated 3 years ago
- ☆22Jul 21, 2023Updated 2 years ago
- Parallel solution for local RNA secondary structure analysis☆12Feb 14, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.☆32Oct 14, 2024Updated last year
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated last year
- Source code of the Stanford Ribonanza RNA Folding first place solution☆41Dec 21, 2023Updated 2 years ago
- Accelerate Molecular Biology Research with Machine Learning☆50Updated this week
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆107May 23, 2025Updated 11 months ago
- ☆110Nov 28, 2023Updated 2 years ago
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆51Nov 23, 2023Updated 2 years ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆84Apr 3, 2026Updated 3 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- RNA secondary structure prediction tool☆20Apr 7, 2026Updated 3 weeks ago
- Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learni…☆34Apr 3, 2021Updated 5 years ago
- Two-Dimensional Template Matching implemented in Python☆16Updated this week
- a library for massive analyses of internal voids in biomolecules and ligand transport through them☆10Updated this week
- Nextflow workshop materials November 2025☆18Mar 14, 2026Updated last month
- Template-based RNA secondary structure visualization☆29Nov 20, 2024Updated last year
- Nature Methods: RNA foundation model (together with RhoFold)☆367May 27, 2025Updated 11 months ago