robpearc / DeepFoldRNA
☆30Updated last year
Alternatives and similar repositories for DeepFoldRNA:
Users that are interested in DeepFoldRNA are comparing it to the libraries listed below
- ☆49Updated 9 months ago
- RNA Multiple Sequence Alignment☆34Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆45Updated 3 months ago
- Protein folding in Pymol☆107Updated 2 months ago
- Efficient implementatin of ESM family.☆53Updated last month
- ☆68Updated 4 years ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆28Updated 7 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆53Updated 9 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆81Updated last year
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆51Updated 11 months ago
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆44Updated 3 weeks ago
- Public repository describing training and testing of AntiBERTa.☆58Updated last year
- Scripts to benchmark and train foldseek☆35Updated 10 months ago
- ☆66Updated 5 months ago
- ☆61Updated 3 years ago
- open source code for Tencent tFold☆93Updated last week
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆57Updated 3 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆65Updated 6 months ago
- ☆34Updated 2 months ago
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆26Updated 4 months ago
- Code for humanization of antibody and nanobody☆37Updated 3 months ago
- ☆56Updated 11 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆28Updated 2 weeks ago
- Convenience Python APIs for antibody numbering using ANARCI☆94Updated last month
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆53Updated 3 months ago
- PLM based active learning model for protein engineering☆74Updated 7 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆53Updated last week
- Code repository of "Deep generative design of RNA family sequences"☆31Updated 8 months ago
- Tool for rapid clustering of antibody models by the structure of their CDRs.☆20Updated 4 months ago
- Geometric deep learning of protein–DNA binding specificity☆64Updated this week