pylelab / rMSALinks
RNA Multiple Sequence Alignment
☆46Updated 2 years ago
Alternatives and similar repositories for rMSA
Users that are interested in rMSA are comparing it to the libraries listed below
Sorting:
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆58Updated 2 weeks ago
- ☆35Updated last year
- ☆107Updated last year
- Efficient implementatin of ESM family.☆74Updated last month
- ☆36Updated 9 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆85Updated 2 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆82Updated last year
- Protein language model trained on coding DNA☆51Updated last year
- Protein design and variant prediction using autoregressive generative models☆114Updated last year
- PLM based active learning model for protein engineering☆84Updated last year
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆32Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆38Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 7 months ago
- open source code for Tencent tFold☆115Updated 7 months ago
- ☆47Updated 9 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆62Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 4 months ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆164Updated 6 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆77Updated 8 months ago
- Learning the language of protein-protein interactions☆98Updated last month
- Aligning protein generative models with experimental fitness☆108Updated last week
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆66Updated last year
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆54Updated 6 months ago
- Making Protein Language Modeling Accessible to All Biologists☆121Updated last week
- ☆74Updated last year
- Inference code for Bio-Inspired Antibody Language Model☆25Updated last year
- Geometric deep learning of protein–DNA binding specificity☆77Updated 7 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- ☆70Updated 4 years ago