Code repository of "Deep generative design of RNA family sequences"
☆42Apr 8, 2026Updated 2 months ago
Alternatives and similar repositories for rfamgen
Users that are interested in rfamgen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Oct 18, 2024Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65May 8, 2026Updated last month
- ☆94Oct 9, 2024Updated last year
- ☆21Oct 31, 2024Updated last year
- Differentiable RNA folding in JAX☆29Mar 25, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆60May 6, 2024Updated 2 years ago
- ☆13May 24, 2026Updated 3 weeks ago
- This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication☆17Jan 2, 2023Updated 3 years ago
- DSDPFlex: Flexible-Receptor Docking with GPU Acceleration☆25Dec 24, 2025Updated 5 months ago
- Nature Methods: RNA foundation model (together with RhoFold)☆379May 27, 2025Updated last year
- ☆11Mar 28, 2024Updated 2 years ago
- Source code of the Stanford Ribonanza RNA Folding first place solution☆42Dec 21, 2023Updated 2 years ago
- Python script for creating and analyzing simulated bpp datasets published in Flouris et al. 2019.☆10May 12, 2019Updated 7 years ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆174Feb 6, 2026Updated 4 months ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆56Nov 17, 2024Updated last year
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- R Shiny application "Vaccine Designer" aiming for the construction of vaccine sequences based on multi epitope design workflow.☆11Jun 25, 2024Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆68Updated this week
- ☆33Jun 1, 2024Updated 2 years ago
- ☆11Feb 10, 2025Updated last year
- Diffusion-based all-atom protein generative model.☆237Aug 27, 2025Updated 9 months ago
- ☆15Aug 22, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆85May 18, 2026Updated last month
- ☆54Dec 3, 2023Updated 2 years ago
- Topological transformer for protein-ligand complex interaction prediction.☆46Nov 25, 2025Updated 6 months ago
- A comprehensive Model Context Protocol (MCP) server that provides access to the AlphaFold Protein Structure Database through a rich set o…☆35Dec 21, 2025Updated 5 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 2 years ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆379Jun 3, 2024Updated 2 years ago
- Scoring methods for predicting the DDG upon protein mutation☆17Feb 20, 2023Updated 3 years ago
- Transformer + GAT for RNA chemical reactivity prediction| Stanford Ribonanza☆11Jan 28, 2026Updated 4 months ago
- ☆97Oct 14, 2025Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The code for paper "Synthetic Promoter Design in Escherichia coli based on Deep Genera-tive Network"☆31Nov 11, 2019Updated 6 years ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆44May 3, 2026Updated last month
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- ☆74Feb 13, 2026Updated 4 months ago
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆308Dec 16, 2025Updated 6 months ago
- REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability☆14Dec 16, 2023Updated 2 years ago
- ☆36Jan 14, 2025Updated last year