lbcb-sci / RiNALMoLinks
RiboNucleic Acid (RNA) Language Model
☆148Updated 3 months ago
Alternatives and similar repositories for RiNALMo
Users that are interested in RiNALMo are comparing it to the libraries listed below
Sorting:
- ☆92Updated last year
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆67Updated last year
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆104Updated 2 weeks ago
- Protein language model trained on coding DNA☆53Updated last year
- ☆77Updated 8 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆85Updated 11 months ago
- Geometric deep learning of protein–DNA binding specificity☆77Updated 9 months ago
- Code repository of "Deep generative design of RNA family sequences"☆40Updated 2 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆106Updated last week
- ☆51Updated last year
- Repository for mRNA Paper and CodonBERT publication.☆141Updated last year
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆56Updated last year
- ☆76Updated last year
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆203Updated 7 months ago
- ☆120Updated last year
- open source code for Tencent tFold☆137Updated 10 months ago
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- ☆38Updated 2 years ago
- ☆57Updated 2 years ago
- ☆109Updated 2 years ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆168Updated 8 months ago
- MSA Transformer reproduction code☆88Updated 4 years ago
- Multi-task and masked language model-based protein sequence embedding models.☆104Updated 4 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆88Updated last year
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model☆189Updated last month
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆52Updated 2 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- CodonTransformer (1M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression☆191Updated 5 months ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆75Updated 2 years ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Updated 2 months ago