☆26Jul 21, 2023Updated 3 years ago
Alternatives and similar repositories for Arena
Users that are interested in Arena are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Very flexible tools for plotting and analyzing all kinds of RNA structure data☆16Jul 31, 2026Updated 2 months ago
- ☆43Oct 1, 2023Updated 3 years ago
- RNAdvisor is a docker-based wrapper that integrates other metrics and scoring functions for RNA 3D structure evaluation.☆18May 6, 2025Updated last year
- RNA secondary structure prediction tool☆21Aug 25, 2026Updated last month
- Protein binding site prediction with transformers☆18Jul 7, 2026Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆191Sep 21, 2026Updated 2 weeks ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆71May 8, 2026Updated 5 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆87Sep 13, 2026Updated 3 weeks ago
- RNA Structural Covariation Above Phylogenetic Expectation☆25Sep 21, 2026Updated 2 weeks ago
- ☆17Jul 28, 2022Updated 4 years ago
- Source code for the reproduction of RibbonFold paper.☆12May 10, 2025Updated last year
- ☆17Jan 13, 2026Updated 8 months ago
- ☆19Jan 18, 2026Updated 8 months ago
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆26Oct 2, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆54Jan 28, 2026Updated 8 months ago
- QRNAS: Quick Refinement of Nucleic Acid Structures☆18Apr 30, 2025Updated last year
- neuropeptide prediction☆15Sep 2, 2022Updated 4 years ago
- RNA 3D structure prediction using multiple sequence alignment information docs @ http://EvoClustRNA.rtfd.io☆14Nov 3, 2022Updated 3 years ago
- EnsembleFlex - Flexibility Analysis of Structure Ensembles☆20Sep 10, 2025Updated last year
- A distance distribution-based visualization method for atomic pair energy and precise prediction of absolute binding free energy.☆18Feb 4, 2025Updated last year
- The package used to win the ARIEL challenge 2023 by the AstroAI team @ CfA | Harvard & Smithsonian☆10Jul 31, 2023Updated 3 years ago
- Toolkit for structure-based deep learning on RNA.☆46Updated this week
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆249May 29, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 2 months ago
- A Python library containing RNA-related bioinformatics functions and classes.☆23Updated this week
- A Python application to find and classify tetrads and quadruplexes in DNA/RNA 3D structures☆20Oct 2, 2026Updated last week
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21May 20, 2019Updated 7 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- ☆16Aug 18, 2026Updated last month
- Visualize global properties of large RNAs using GraphViz force-directed layout.☆24Sep 7, 2023Updated 3 years ago
- NUPACK is a growing software suite for the analysis and design of nucleic acid structures, devices, and systems.☆15Apr 1, 2021Updated 5 years ago
- A platform to do RNA science☆28Mar 7, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- EXPRORER: Rational cosolvents set construction method for cosolvent molecular dynamics (CMD) with large-scale computation☆11Jul 28, 2022Updated 4 years ago
- ☆29Jul 10, 2020Updated 6 years ago
- ☆11Mar 18, 2024Updated 2 years ago
- Template-based RNA secondary structure visualization☆29Aug 31, 2026Updated last month
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Sep 24, 2026Updated 2 weeks ago
- RNAPro is a state-of-the-art RNA 3D folding model developed in collaboration with the hosts and winners of the Stanford RNA 3D Folding Ka…☆98Jun 5, 2026Updated 4 months ago