yikunpku / RNA-MSMLinks
Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding and attention map to match different types of downstream tasks.
☆65Updated last year
Alternatives and similar repositories for RNA-MSM
Users that are interested in RNA-MSM are comparing it to the libraries listed below
Sorting:
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆75Updated 7 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆59Updated 2 weeks ago
- RiboNucleic Acid (RNA) Language Model☆127Updated 3 months ago
- open source code for Tencent tFold☆113Updated 6 months ago
- ☆35Updated last year
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆66Updated last month
- ☆68Updated 3 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆118Updated 6 months ago
- ☆113Updated last year
- RNA Multiple Sequence Alignment☆45Updated 2 years ago
- MSA Transformer reproduction code☆84Updated 3 years ago
- Efficient implementatin of ESM family.☆73Updated 2 weeks ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆80Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆104Updated 2 weeks ago
- ☆115Updated 2 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Fitness landscapes for antibodies☆85Updated 3 weeks ago
- ☆108Updated last year
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated 2 months ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆22Updated last week
- Aligning protein generative models with experimental fitness☆106Updated last month
- Masif seed paper repository☆159Updated this week
- 🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)☆139Updated 3 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆47Updated last year
- Generative Language Modeling for Antibody Design☆163Updated 11 months ago
- ☆80Updated 3 months ago
- ☆116Updated 3 months ago
- Official Implementation of IgGM☆124Updated this week
- Protein language model trained on coding DNA☆50Updated 11 months ago