Alternatives and similar repositories for RNA-MSM

Users that are interested in RNA-MSM are comparing it to the libraries listed below

• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆56Updated 4 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆42Updated last year
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆60Updated 4 months ago
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆56Updated 6 months ago
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆35Updated 11 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆101Updated 3 months ago
• Bruce-ywj / ERNIE-RNA
  Code of a structure-enhanced RNA language model named ERNIE-RNA
  ☆21Updated last month
• robpearc / DeepFoldRNA
  ☆35Updated last year
• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆109Updated 3 weeks ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆75Updated last year
• a96123155 / UTR-LM
  ☆88Updated 8 months ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆99Updated last month
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆64Updated 3 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆59Updated 2 years ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆62Updated last year
• timkartar / DeepPBS
  Geometric deep learning of protein–DNA binding specificity
  ☆74Updated 3 months ago
• tymor22 / tm-vec
  ☆68Updated 9 months ago
• westlake-repl / ESM-Ezy
  ☆23Updated 2 months ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆47Updated 8 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆73Updated 5 months ago
• prihoda / AbNumber
  Convenience Python APIs for antibody numbering using ANARCI
  ☆96Updated last month
• RSchmirler / data-repo_plm-finetune-eval
  Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"
  ☆40Updated 9 months ago
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆113Updated 3 months ago
• zhanghaicang / carbonmatrix_public
  ☆115Updated 2 weeks ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆109Updated 5 months ago
• aqlaboratory / rgn2
  ☆106Updated last year
• uci-cbcl / UFold
  ☆69Updated 2 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆42Updated 6 months ago
• chandar-lab / AMPLIFY
  ☆104Updated 3 weeks ago
• Doudna-lab / GARNET_DL
  ☆37Updated 5 months ago