ml4bio / RNA-FMLinks
Nature Methods: RNA foundation model (together with RhoFold)
☆276Updated last week
Alternatives and similar repositories for RNA-FM
Users that are interested in RNA-FM are comparing it to the libraries listed below
Sorting:
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆158Updated last week
- Official repository for the ProteinGym benchmarks☆311Updated last month
- RiboNucleic Acid (RNA) Language Model☆102Updated 2 weeks ago
- List of computational protein design research labs☆177Updated 3 months ago
- ☆247Updated 10 months ago
- Efficient evolution from protein language models☆203Updated last year
- RoseTTAFold2 protein/nucleic acid complex prediction☆360Updated last year
- Bilingual Language Model for Protein Sequence and Structure☆247Updated 5 months ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆457Updated 3 weeks ago
- ☆108Updated 10 months ago
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆131Updated 2 months ago
- [ICLR 2024] DNABERT-2: Efficient Foundation Model and Benchmark for Multi-Species Genome☆382Updated 5 months ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆359Updated last year
- ☆313Updated 9 months ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆312Updated 7 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆255Updated 2 months ago
- ☆277Updated last week
- A collection of *fold* tools☆293Updated 8 months ago
- Protein hallucination and inpainting with RoseTTAFold☆259Updated 2 years ago
- User friendly and accurate binder design pipeline☆539Updated this week
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆266Updated 2 months ago
- Multi-task and masked language model-based protein sequence embedding models.☆102Updated 3 years ago
- ☆382Updated 3 months ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆62Updated 10 months ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆322Updated last year
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆159Updated 2 years ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆284Updated 4 months ago
- Repository for mRNA Paper and CodonBERT publication.☆130Updated 11 months ago
- ☆210Updated last month
- Deep functional residue identification☆322Updated 2 years ago