☆37Jan 14, 2025Updated last year
Alternatives and similar repositories for GARNET_DL
Users that are interested in GARNET_DL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Oct 18, 2024Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆54Nov 17, 2024Updated last year
- ☆16Feb 20, 2026Updated 2 months ago
- We propose PepBCL, a novel BERT (Bidirectional Encoder Representation from Transformers)-based Contrastive Learning framework to predict …☆16Mar 29, 2023Updated 3 years ago
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆23Apr 17, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65Apr 3, 2026Updated 3 weeks ago
- Nature Methods: RNA foundation model (together with RhoFold)☆367May 27, 2025Updated 11 months ago
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆297Dec 16, 2025Updated 4 months ago
- Scalable Deep Learning for RNA Secondary Structure Prediction☆42Sep 23, 2025Updated 7 months ago
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆23May 11, 2025Updated 11 months ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆67Jul 17, 2024Updated last year
- Benchmarking scripts for Gaia☆15Apr 10, 2025Updated last year
- RiboNucleic Acid (RNA) Language Model☆161Oct 3, 2025Updated 6 months ago
- GeneBac: a modular framework for predicting antibiotic resistance from DNA sequence.☆18Jan 3, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆22Jun 26, 2023Updated 2 years ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆18Jun 10, 2022Updated 3 years ago
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- Rapid structure-based virtual screening for RNA targets.☆28Apr 22, 2026Updated last week
- Draw RNA secondary structures in python.☆52Jun 24, 2025Updated 10 months ago
- Toolkit for structure-based deep learning on RNA.☆46Apr 15, 2026Updated 2 weeks ago
- RNA Multiple Sequence Alignment☆51Jul 20, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Aligning protein generative models with experimental fitness☆120Mar 12, 2026Updated last month
- Code to build models that effectively predict promoter-driven gene expression☆12May 15, 2025Updated 11 months ago
- ☆128Feb 20, 2026Updated 2 months ago
- RNAPro is a state-of-the-art RNA 3D folding model developed in collaboration with the hosts and winners of the Stanford RNA 3D Folding Ka…☆81Jan 17, 2026Updated 3 months ago
- Protein representation and design under a single training scheme☆24Updated this week
- ☆16Dec 10, 2025Updated 4 months ago
- Compressing protein structures effectively with torsion angles☆193Feb 10, 2026Updated 2 months ago
- ☆20Jul 16, 2024Updated last year
- init commit☆15Oct 31, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Deconvolution of RNA Alternative COnformations☆15Updated this week
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆69Jul 22, 2024Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆324Jul 19, 2024Updated last year
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆131Updated this week
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆152Apr 16, 2025Updated last year
- ☆13Oct 19, 2023Updated 2 years ago
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago