☆35Jan 14, 2025Updated last year
Alternatives and similar repositories for GARNET_DL
Users that are interested in GARNET_DL are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Oct 18, 2024Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆56Nov 17, 2024Updated last year
- Python implementation of the FR3D software for searching and annotating RNA 3D structures☆24Jul 1, 2026Updated 2 weeks ago
- ☆18Jul 1, 2026Updated 2 weeks ago
- We propose PepBCL, a novel BERT (Bidirectional Encoder Representation from Transformers)-based Contrastive Learning framework to predict …☆18Mar 29, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆68May 8, 2026Updated 2 months ago
- Nature Methods: RNA foundation model (together with RhoFold)☆386May 27, 2025Updated last year
- Scalable Deep Learning for RNA Secondary Structure Prediction☆43Sep 23, 2025Updated 9 months ago
- ☆17Jun 22, 2024Updated 2 years ago
- Learning to Generate UTR Sequences for Optimized Ribosome Load and Gene Expression☆24May 11, 2025Updated last year
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆70Jun 16, 2026Updated last month
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆23Jun 26, 2023Updated 3 years ago
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆18Jun 10, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago
- gRNAde is a Generative AI framework for inverse design of 3D RNA structure and function☆309Dec 16, 2025Updated 7 months ago
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated 2 years ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 2 years ago
- Draw RNA secondary structures in python.☆54Jun 24, 2025Updated last year
- RiboNucleic Acid (RNA) Language Model☆169May 4, 2026Updated 2 months ago
- Toolkit for structure-based deep learning on RNA.☆45Updated this week
- RNA Multiple Sequence Alignment☆53Jul 20, 2023Updated 3 years ago
- EPSAPG: An Extensive Protein Sequence Alignment Profiles Generator Pipeline Combining MMseqs2 and PSI-BLAST☆11Apr 4, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Rapid structure-based virtual screening for RNA targets.☆29Apr 22, 2026Updated 2 months ago
- Code to build models that effectively predict promoter-driven gene expression☆12May 15, 2025Updated last year
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆199Jul 10, 2026Updated last week
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆71Jul 22, 2024Updated last year
- ☆16Dec 10, 2025Updated 7 months ago
- ☆135May 19, 2026Updated 2 months ago
- Compressing protein structures effectively with torsion angles☆194Jun 30, 2026Updated 2 weeks ago
- ☆21Jul 16, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- init commit☆16Oct 31, 2023Updated 2 years ago
- GeneBac: a modular framework for predicting antibiotic resistance from DNA sequence.☆18Jan 3, 2024Updated 2 years ago
- Deconvolution of RNA Alternative COnformations☆15Jun 24, 2026Updated 3 weeks ago
- Fast protein backbone generation with SE(3) flow matching.☆327Jul 19, 2024Updated 2 years ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆155Apr 16, 2025Updated last year
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year