satoken / centroid-rna-package
Centroid RNA package
☆19Updated 4 years ago
Related projects ⓘ
Alternatives and complementary repositories for centroid-rna-package
- Template-based RNA secondary structure visualization☆24Updated 11 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆65Updated 3 weeks ago
- Mutation effects predicted from sequence co-variation☆61Updated 7 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆48Updated 3 months ago
- Direct coupling analysis software for protein and RNA sequences☆45Updated last year
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆77Updated 7 months ago
- Fast and accurate protein structure prediction☆49Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆50Updated this week
- Evolutionary conservation estimation of residues or nucleotides☆33Updated 2 years ago
- Detection of remote homology by comparison of protein language model representations☆44Updated last week
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆49Updated 3 months ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆70Updated 2 months ago
- PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.☆22Updated last year
- Automatic oligonucleotide design for PCR-based gene synthesis☆37Updated 5 years ago
- A platform to do RNA science☆27Updated 3 years ago
- An RNA manipulation library.☆52Updated 8 months ago
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆89Updated last month
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆62Updated last year
- Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening☆30Updated last month
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆16Updated last year
- Python framework for doing ancestral sequence reconstruction☆34Updated 4 months ago
- Evolutionary velocity with protein language models☆83Updated last year
- A domain parser for Alphafold models☆32Updated 10 months ago
- PyMOL extension to color AlphaFold structures by confidence (pLDDT).☆71Updated 3 months ago
- ☆29Updated 10 months ago
- ☆45Updated 5 months ago
- ☆66Updated last year
- ColabFold protocol☆42Updated 3 weeks ago
- ☆63Updated last month
- Comprehensive Python client for the Uniprot REST API☆44Updated 2 months ago