mana438 / RNABERTLinks
☆56Updated last year
Alternatives and similar repositories for RNABERT
Users that are interested in RNABERT are comparing it to the libraries listed below
Sorting:
- ☆90Updated 10 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆102Updated 2 weeks ago
- python tools for TCR:peptide-MHC modeling and analysis☆81Updated last year
- Multi-task and masked language model-based protein sequence embedding models.☆102Updated 4 years ago
- RiboNucleic Acid (RNA) Language Model☆120Updated 2 months ago
- ☆29Updated 2 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆178Updated last year
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆140Updated 2 months ago
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆92Updated last week
- ☆35Updated last year
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆49Updated 10 months ago
- Protein language model trained on coding DNA☆49Updated 10 months ago
- ☆69Updated 4 months ago
- Neural Networks for Protein Sequence Alignment☆125Updated 9 months ago
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆65Updated last year
- Repository for mRNA Paper and CodonBERT publication.☆134Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆35Updated last year
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆105Updated 3 months ago
- TEIM: TCR-Epitope Interaction Modeling☆51Updated 2 years ago
- ☆107Updated last year
- Efficient evolution from protein language models☆212Updated 2 years ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆156Updated last year
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆66Updated last year
- Bilingual Language Model for Protein Sequence and Structure☆266Updated 7 months ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 5 months ago
- ☆50Updated last year
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆22Updated last year
- Large language modeling applied to T-cell receptor (TCR) sequences.☆56Updated 3 years ago
- ☆77Updated last year
- ☆68Updated 11 months ago