darelab2014 / DinoporeLinks
DInoPORE: Direct detection of INOsines in native RNA with nanoPORE sequencing
☆18Updated 2 years ago
Alternatives and similar repositories for Dinopore
Users that are interested in Dinopore are comparing it to the libraries listed below
Sorting:
- Deep learning model used to detect RNA m6a with read level based on the Nanopore direct RNA data.☆22Updated 2 years ago
- ☆14Updated last year
- DeepEdit: single-molecule detection and phasing of A-to-I RNA editing events using Nanopore direct RNA sequencing☆17Updated 2 years ago
- ☆23Updated 2 years ago
- An m6A-aware basecalling model to detect m6A modifications at single nucleotide resolution in individual reads (Cruciani, Delgado-Tejedo…☆16Updated 4 months ago
- Xron - an omni basecaller for ONT reads.☆22Updated 7 months ago
- NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)☆31Updated last week
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆11Updated 9 months ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆40Updated 11 months ago
- DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads☆50Updated 4 months ago
- A python program to call methylation (m6A in DNA) from nanopore signal data☆47Updated 4 years ago
- Variant calling tool for long-read sequencing data☆110Updated 3 months ago
- Reference-free reconstruction and error correction of transcriptomes from Nanopore long-read sequencing☆57Updated last year
- Methylation Phasing for Nanopore Sequencing☆48Updated 2 years ago
- Somatic structural variant caller for long-read data☆71Updated last month
- ☆71Updated 6 months ago
- Collection of tools for the analysis of CpG data☆86Updated last week
- Detecting genome structural variants with deep learning in single molecule sequencing☆111Updated 3 months ago
- Visualise and analyse nanopore (ONT) raw signals☆117Updated this week
- ☆61Updated 11 months ago
- ☆48Updated 10 months ago
- Fast and accurate coordinate conversion between assemblies☆113Updated 3 months ago
- Research release basecalling models and configurations☆113Updated last month
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆30Updated 2 months ago
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆31Updated 3 months ago
- Detecting methylation using signal-level features from Nanopore sequencing reads of plants☆61Updated last year
- Error correction of ONT transcript reads☆58Updated last year
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆61Updated 9 months ago
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆93Updated last month
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆114Updated last week