uedaLabR / nanoDocLinks
RNA modification detection using Nanopore raw reads with Deep One Class classification
☆19Updated 4 years ago
Alternatives and similar repositories for nanoDoc
Users that are interested in nanoDoc are comparing it to the libraries listed below
Sorting:
- Prediction of RNA modifications and their stoichiometry from per-read features: current intensity, dwell time and trace (Begik*, Lucas* e…☆24Updated 2 years ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Updated 5 years ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆42Updated last year
- Long-read Isoform Quantification and Analysis☆38Updated 8 months ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated 2 years ago
- A python tool box for fast and accurate quality control, conversion and alignment of nanopore sequencing data☆20Updated 3 years ago
- ☆37Updated last year
- An accurate repeat detection from Nanopore data using deep learning and image techniques☆24Updated 2 years ago
- ☆33Updated 3 years ago
- POSTRE: Prediction Of STRuctural variant Effects