ewbell94 / PEPPILinks
Pipeline for protein-protein interaction prediction
☆25Updated 3 years ago
Alternatives and similar repositories for PEPPI
Users that are interested in PEPPI are comparing it to the libraries listed below
Sorting:
- ☆30Updated last year
- Graph Network for protein-protein interface including language model features☆32Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆61Updated 3 months ago
- GTalign, high-performance protein structure alignment, superposition and search☆51Updated 2 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆27Updated 7 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- Fast and accurate protein structure prediction☆56Updated 9 months ago
- ☆53Updated 2 months ago
- Generator and regressor neural networks for antimicrobial peptides☆25Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆42Updated 5 months ago
- Tools for annotation, processing and ML for antibody sequences☆33Updated 2 weeks ago
- Python package to manage protein structures and their annotations☆44Updated last year
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- ☆43Updated last year
- Set of useful HADDOCK utility scripts☆55Updated last month
- ☆17Updated 2 weeks ago
- ColabFold protocol☆55Updated last year
- Machine learning prediction of enzyme optimum pH☆47Updated 6 months ago
- Evolutionary conservation estimation of residues or nucleotides☆51Updated 3 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- Fragment binding prediction with ColabFold☆37Updated 7 months ago
- ☆23Updated 2 years ago
- ☆25Updated 7 months ago
- A Motif-Based PPI Searching Pipeline for PPI Mining and Protein Design☆19Updated 8 months ago
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆67Updated last year
- ☆22Updated last week
- Geometry-aware protein binding site predictor☆24Updated last year
- ☆17Updated 2 years ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 4 months ago