Alternatives and similar repositories for DegScore:

Users that are interested in DegScore are comparing it to the libraries listed below

• DasLab / RiboGraphViz
  Visualize global properties of large RNAs using GraphViz force-directed layout.
  ☆20Updated last year
• johli / scrambler
  Interpretation by Deep Generative Masking for Biological Sequences
  ☆37Updated 3 years ago
• hendrixlab / bpRNA
  bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure
  ☆47Updated last year
• DasLab / draw_rna
  Draw RNA secondary structures in python.
  ☆47Updated 7 months ago
• Doudna-lab / GARNET_DL
  ☆36Updated 2 months ago
• songlab-cal / CPT
  Cross-protein transfer learning for variant effect prediction
  ☆20Updated last year
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆90Updated last year
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆35Updated 7 months ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆38Updated last month
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆37Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆58Updated 4 years ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆57Updated 8 months ago
• jbloomlab / SARS-CoV-2-RBD_DMS
  Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
  ☆44Updated 3 years ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆46Updated 5 months ago
• graph-part / graph-part
  GraphPart, a data partitioning method for ML on biological sequences
  ☆26Updated last year
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆67Updated 2 years ago
• johli / seqprop
  Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor
  ☆48Updated 8 months ago
• GreiffLab / manuscript_ab_epitope_interaction
  ☆24Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆38Updated 3 years ago
• eternagame / EternaBench
  Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.
  ☆16Updated 2 years ago
• OATML / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆65Updated 2 years ago
• microsoft / protnote
  ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…
  ☆34Updated last month
• bio-ontology-research-group / deepgozero
  DeepGO with Fuzzy DL
  ☆30Updated 2 years ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆54Updated last year
• sacdallago / biotrainer
  Biological prediction models made simple.
  ☆41Updated this week
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆52Updated 11 months ago
• gitter-lab / nn4dms
  Neural networks for deep mutational scanning data
  ☆68Updated 5 months ago
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆48Updated 5 months ago
• yjcyxky / antibody-dl
  A Collection of Platform, Tools, and Resources for Antibody Engineering
  ☆15Updated last year