CatIIIIIIII / RNAErnieLinks
Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
☆56Updated last year
Alternatives and similar repositories for RNAErnie
Users that are interested in RNAErnie are comparing it to the libraries listed below
Sorting:
- ☆92Updated last year
- ☆52Updated 2 years ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 10 months ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆34Updated 2 months ago
- RiboNucleic Acid (RNA) Language Model☆151Updated 3 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆87Updated last year
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆104Updated 2 weeks ago
- Protein language model trained on coding DNA☆53Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆107Updated 3 weeks ago
- Code repository of "Deep generative design of RNA family sequences"☆40Updated 2 months ago
- open source code for Tencent tFold☆140Updated 10 months ago
- This repository hosts the software of GEMORNA, a generative AI tool for mRNA sequence design.☆79Updated 2 months ago
- Official release of the ProGen models☆53Updated last year
- ☆97Updated 7 months ago
- ☆121Updated last year
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Updated 2 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆115Updated 5 months ago
- Learning the language of protein-protein interactions☆124Updated 2 weeks ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆86Updated 11 months ago
- ☆76Updated last year
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆67Updated last year
- predicting peptide-protein interactions☆137Updated 2 years ago
- Repository for mRNA Paper and CodonBERT publication.☆142Updated last year
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆29Updated last year
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆206Updated 8 months ago
- ☆48Updated 4 years ago
- ☆32Updated 3 months ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆36Updated 6 months ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆74Updated last month
- Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…☆46Updated last year