CatIIIIIIII / RNAErnie
Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"
☆42Updated 5 months ago
Alternatives and similar repositories for RNAErnie:
Users that are interested in RNAErnie are comparing it to the libraries listed below
- ☆48Updated last year
- ☆78Updated 5 months ago
- Geometric deep learning of protein–DNA binding specificity☆64Updated last week
- Protein language model trained on coding DNA☆46Updated 5 months ago
- ☆51Updated last year
- ☆66Updated 6 months ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆28Updated last year
- ☆71Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆32Updated 8 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆72Updated 11 months ago
- ☆62Updated last month
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆19Updated 7 months ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆19Updated 3 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆31Updated 3 months ago
- ☆41Updated 3 years ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆56Updated 8 months ago
- Predicting immunogenic peptide recognized by TCR through ensemble deep learning☆14Updated 11 months ago
- ☆19Updated 2 years ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆101Updated 6 months ago
- Multi-Teacher Distillation for Protein embedding☆10Updated 9 months ago
- GPro: a toolbox for Generative approaches in promoter design☆19Updated last year
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆50Updated 11 months ago
- ☆17Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆96Updated 6 months ago
- ☆22Updated 2 months ago
- ☆31Updated last year
- ☆36Updated 2 months ago
- Feature map and function annotation of Proteins☆32Updated 9 months ago
- ☆98Updated 8 months ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆27Updated 2 months ago