ratthachat / deep-rnaLinks
Easy & Pretrained SOTA Deep Learning for RNA strings
☆12Updated 3 years ago
Alternatives and similar repositories for deep-rna
Users that are interested in deep-rna are comparing it to the libraries listed below
Sorting:
- Open source code for AlphaFold to extract protein embeddings☆26Updated 3 years ago
- Curated list on Deep Transformers Applications on Biology and Chemistry☆18Updated 2 years ago
- Library of models for Protein Function prediction (part of the 18th top solution out of 1625 teams in CAFA5)☆19Updated last month
- A tool for predicting the effects of missense mutations on protein stability changes upon missense mutation using protein sequence only. …☆22Updated 2 years ago
- Deep learning datasets for RNA 3D and 2.5D structures.☆39Updated 2 weeks ago
- Learning with uncertainty for biological discovery and design☆34Updated 2 years ago
- ☆34Updated 4 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- LoRA for protein language models☆38Updated last year
- Shows some of the ways molecule generation and optimization can go wrong☆17Updated last year
- ☆17Updated 2 years ago
- SE(3)-equivariant point cloud networks for virtual screening☆20Updated 2 years ago
- Drug Discovery under Covariate Shift with Domain-Informed Prior Distributions over Functions☆24Updated last year
- ☆12Updated 3 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 6 months ago
- ☆12Updated 7 months ago
- Homology reduced UniProt, train-/valid-/testsets for language modeling☆17Updated 3 years ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆21Updated 6 months ago
- Tutorial for "Advances in machine learning for molecules" (for Summer School for Machine Learning in Bioinformatics, https://cs.hse.ru/ss…☆20Updated 4 years ago
- Predict protein thermostability with ML☆19Updated 10 months ago
- GeneDisco is a benchmark suite for evaluating active learning algorithms for experimental design in drug discovery.☆38Updated last year
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Epistatic Net is an algorithm which allows for spectral regularization of deep neural networks to predict biological fitness functions (e…☆18Updated 3 years ago
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Updated last year
- A 3D-equivariant neural network for protein structure accuracy estimation☆18Updated 2 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆39Updated 3 months ago
- pytoda - PaccMann PyTorch Dataset Classes. Read the docs: https://paccmann.github.io/paccmann_datasets/☆28Updated 8 months ago
- ☆12Updated 4 years ago
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆20Updated last year
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago