Source code of the Stanford Ribonanza RNA Folding first place solution
☆41Dec 21, 2023Updated 2 years ago
Alternatives and similar repositories for vigg_ribonanza
Users that are interested in vigg_ribonanza are comparing it to the libraries listed below
Sorting:
- ☆19Jan 11, 2024Updated 2 years ago
- Multi-encoder segmentation for contrail detection in satellite imagery | Google Researc☆11Jan 28, 2026Updated last month
- ☆13Dec 6, 2022Updated 3 years ago
- RNA secondary structure prediction tool☆20Feb 18, 2026Updated 2 weeks ago
- ☆42Jan 28, 2026Updated last month
- ☆23Dec 19, 2023Updated 2 years ago
- ☆23Jul 14, 2024Updated last year
- MULAN: Multimodal Protein Language Model for Sequence and Structure Encoding☆24May 22, 2025Updated 9 months ago
- Transformer + GAT for RNA chemical reactivity prediction| Stanford Ribonanza☆11Jan 28, 2026Updated last month
- to assess structural quality of RNA using 3D CNN☆13Aug 17, 2018Updated 7 years ago
- ☆15Jan 27, 2025Updated last year
- RNA Multiple Sequence Alignment☆49Jul 20, 2023Updated 2 years ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆66Jul 17, 2024Updated last year
- ARES implement in PyTorch☆15Feb 27, 2024Updated 2 years ago
- Implementation of "Denoise Pretraining on Non-equilibrium Molecular Conformations for Accurate and Transferable Neural Potentials" in PyT…☆14Jul 26, 2023Updated 2 years ago
- VS Code Extension for Kaggle☆22Dec 9, 2024Updated last year
- Solution of Kaggle competition: HuBMAP - Hacking the Human Vasculature☆36Aug 23, 2023Updated 2 years ago
- ☆38Dec 15, 2023Updated 2 years ago
- My solution for the Kaggle competition of LEAP (ClimSim)☆17Jul 31, 2024Updated last year
- ☆36Jan 14, 2025Updated last year
- ☆57Oct 2, 2023Updated 2 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆63Feb 12, 2026Updated 3 weeks ago
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆25Dec 3, 2024Updated last year
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆184Feb 25, 2026Updated last week
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆217May 29, 2025Updated 9 months ago
- Toolkit for structure-based deep learning on RNA.☆44Feb 9, 2026Updated last month
- ☆32Apr 9, 2024Updated last year
- Repository of IPBench☆19Jan 4, 2026Updated 2 months ago
- ☆24Oct 2, 2025Updated 5 months ago
- ipole (master, originally published), ipole-v2.0 (v2.0 is more compact with additional features). This is the original repository for the…☆14May 6, 2021Updated 4 years ago
- Perl scripts for analysis RIC-seq data☆11Feb 6, 2020Updated 6 years ago
- ☆13Mar 4, 2017Updated 9 years ago
- Getting started with PySpark for Big data analysis☆10Aug 24, 2022Updated 3 years ago
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆10Feb 10, 2024Updated 2 years ago
- ☆13Nov 5, 2024Updated last year
- Library implementation of "No Train, all Gain: Self-Supervised Gradients Improve Deep Frozen Representations"☆40Oct 31, 2024Updated last year
- Predicting high-fitness mutations based on protein inverse folding models☆75Sep 30, 2025Updated 5 months ago
- [TMLR 2024 J2C Certification] Generalizing Denoising to Non-Equilibrium Structures Improves Equivariant Force Fields☆41Feb 11, 2025Updated last year
- ☆37Mar 9, 2024Updated 2 years ago