Source code of the Stanford Ribonanza RNA Folding first place solution
☆42Dec 21, 2023Updated 2 years ago
Alternatives and similar repositories for vigg_ribonanza
Users that are interested in vigg_ribonanza are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Jan 11, 2024Updated 2 years ago
- ☆13Dec 6, 2022Updated 3 years ago
- RiboNucleic Acid (RNA) Language Model☆172May 4, 2026Updated 3 months ago
- Multi-encoder segmentation for contrail detection in satellite imagery | Google Researc☆12Jan 28, 2026Updated 6 months ago
- 2nd Place Solution for the Google Research - Identify Contrails to Reduce Global Warming Competition☆14Aug 15, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- RNA secondary structure prediction tool☆21Jul 31, 2026Updated 3 weeks ago
- RNA Multiple Sequence Alignment☆53Jul 20, 2023Updated 3 years ago
- A Python library containing RNA-related bioinformatics functions and classes.☆23Updated this week
- Transformer + GAT for RNA chemical reactivity prediction| Stanford Ribonanza☆11Jan 28, 2026Updated 6 months ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆71Jun 16, 2026Updated 2 months ago
- to assess structural quality of RNA using 3D CNN☆15Aug 17, 2018Updated 8 years ago
- ☆23Dec 19, 2023Updated 2 years ago
- Implementation of "Denoise Pretraining on Non-equilibrium Molecular Conformations for Accurate and Transferable Neural Potentials" in PyT…☆14Jul 26, 2023Updated 3 years ago
- My solution for the Kaggle competition of LEAP (ClimSim)☆18Jul 31, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- MULAN: Multimodal Protein Language Model for Sequence and Structure Encoding☆25May 22, 2025Updated last year
- Evaluating RNA structure prediction using diverse thermodynamic prediction tasks and high-throughput datasets.☆18Jun 10, 2022Updated 4 years ago
- Public version for Distance-AF☆32Aug 17, 2025Updated last year
- ☆52Jan 28, 2026Updated 6 months ago
- Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.☆111Nov 20, 2025Updated 9 months ago
- ☆35Jan 14, 2025Updated last year
- ☆39Dec 15, 2023Updated 2 years ago
- ☆25Jul 21, 2023Updated 3 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆68May 8, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated 2 years ago
- Fourth place solution to the "OpenVaccine: COVID-19 mRNA Vaccine Degradation Prediction" organized by Stanford University and Kaggle☆21Oct 16, 2020Updated 5 years ago
- Code for the THItoGene☆31Apr 9, 2025Updated last year
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Aug 10, 2026Updated last week
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆27Dec 3, 2024Updated last year
- Toolkit for structure-based deep learning on RNA.☆45Updated this week
- OpenSMOG is a Python library for performing molecular dynamics simulations using Structure-Based Models. OpenSMOG uses OpenMM.☆12Jul 10, 2026Updated last month
- 6th Place Solution for the Google - Isolated Sign Language Recognition Kaggle Competition☆14May 4, 2023Updated 3 years ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆244May 29, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CMIP6 interactive data downloader — OPeNDAP subsetting, multi-server failover, 61 models, 197 countries☆26Apr 12, 2026Updated 4 months ago
- Nature Methods: RNA foundation model (together with RhoFold)☆388May 27, 2025Updated last year
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- Predict binding affinity of ligand-protein complexes using Graph Neural Networks. The model is implemented using PyTorch Geometric and ba…☆11Nov 26, 2022Updated 3 years ago
- Building more accurate protein structures from backbone torsion angles☆16Mar 21, 2025Updated last year
- A non-exhaustive list of open resources to help environmental scientists get started with machine learning☆23May 22, 2025Updated last year
- BoostDiff - Inference of differential networks from gene expression data☆13Jan 11, 2024Updated 2 years ago