autosome-ru / vigg_ribonanzaLinks
Source code of the Stanford Ribonanza RNA Folding first place solution
☆41Updated last year
Alternatives and similar repositories for vigg_ribonanza
Users that are interested in vigg_ribonanza are comparing it to the libraries listed below
Sorting:
- ☆37Updated 2 weeks ago
- Ankh: Optimized Protein Language Model☆237Updated 5 months ago
- Protein structure datasets for machine learning.☆112Updated 7 months ago
- ☆58Updated last year
- A geometry-complete diffusion generative model (GCDM) for 3D molecule generation and optimization. (Nature CommsChem)☆220Updated 6 months ago
- ☆47Updated last year
- ☆36Updated last year
- Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch☆159Updated 2 years ago
- torch-molecule is a deep learning package for molecular discovery, designed with an sklearn-style interface for property prediction, inve…☆301Updated 2 months ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆197Updated 6 months ago
- ALL Molecular ML papers from ICLR'25.☆43Updated 8 months ago
- gRNAde: Geometric Deep Learning for 3D RNA inverse design (ICLR 2025 Spotlight)☆235Updated last week
- Regression Transformer (2023; Nature Machine Intelligence)☆159Updated 2 months ago
- SELFormer: Molecular Representation Learning via SELFIES Language Models☆104Updated last year
- Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models …☆258Updated 7 months ago
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆64Updated last year
- Official implementation of DrugGEN: Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Ad…☆89Updated last month
- ☆49Updated 3 weeks ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆145Updated 7 months ago
- Protein language model customized for antibodies☆146Updated 8 months ago
- ALL Molecular ML papers from NeurIPS'24.☆63Updated last year
- Code for the paper Enhancing Activity Prediction Models in Drug Discovery with the Ability to Understand Human Language☆106Updated last year
- A list of manuscripts/tools using diffusion on biological enttieis☆98Updated 2 years ago
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆78Updated last year
- Implementation of ProteinBERT in Pytorch☆164Updated 4 years ago
- GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)☆307Updated 5 months ago
- MULAN: Multimodal Protein Language Model for Sequence and Structure Encoding☆23Updated 6 months ago
- Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding …☆103Updated last year
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆179Updated 2 years ago
- Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation☆126Updated 2 years ago