☆19Mar 21, 2024Updated 2 years ago
Alternatives and similar repositories for rbpnet
Users that are interested in rbpnet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Jan 18, 2024Updated 2 years ago
- ☆30Nov 6, 2022Updated 3 years ago
- Scripts for building computational models of gene regulation with tensorflow☆12Jan 21, 2020Updated 6 years ago
- ☆17Jun 22, 2024Updated 2 years ago
- ☆13Apr 16, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆17May 22, 2025Updated last year
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆32Aug 10, 2021Updated 5 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆22Aug 13, 2026Updated last month
- An Interpretable Self-Attention Network with block-attention and attention-attribution.☆12Sep 22, 2023Updated 3 years ago
- splicing and feature maps for RBPs☆25Sep 8, 2026Updated 2 weeks ago
- ☆30Sep 9, 2025Updated last year
- Interpretation by Deep Generative Masking for Biological Sequences☆37Dec 9, 2021Updated 4 years ago
- Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics☆25Jun 3, 2025Updated last year
- ☆19Oct 21, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Jan 22, 2025Updated last year
- ☆12Jan 31, 2023Updated 3 years ago
- ☆25Apr 15, 2024Updated 2 years ago
- ☆25Jul 29, 2025Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆21Jun 11, 2026Updated 3 months ago
- Interpretable model of sub-cellular RNA localization.☆12Dec 19, 2022Updated 3 years ago
- Elucidating the Utility of Genomic Elements with Neural Nets☆69Dec 2, 2024Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆42Jul 3, 2025Updated last year
- Toolset for training quantitative sequence to function models.☆23Mar 15, 2024Updated 2 years ago
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- ☆42Sep 29, 2022Updated 3 years ago
- the analysis script for PrismNet☆10May 17, 2020Updated 6 years ago
- A useful tool for shuffling biological sequences while preserving the k-let counts☆14Apr 23, 2024Updated 2 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆31Oct 7, 2022Updated 3 years ago
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Nov 29, 2018Updated 7 years ago
- AIDA phase 1 splicing QTL paper☆16Feb 17, 2026Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences☆16Updated this week
- Plot stacked logos for single or multiple DNA, RNA and amino acid sequence☆17Apr 29, 2026Updated 4 months ago
- Primary RNA sequence model☆42May 20, 2024Updated 2 years ago
- ExplaiNN: interpretable and transparent neural networks for genomics☆48Apr 1, 2025Updated last year
- A deep learning method for sgRNA off-target propensity prediction.☆16Mar 17, 2020Updated 6 years ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆12Nov 2, 2023Updated 2 years ago
- Nature Methods: RNA foundation model (together with RhoFold)☆391May 27, 2025Updated last year