jaswindersingh2 / SPOT-RNALinks
RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
☆105Updated 5 months ago
Alternatives and similar repositories for SPOT-RNA
Users that are interested in SPOT-RNA are comparing it to the libraries listed below
Sorting:
- ☆75Updated 6 months ago
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆149Updated 4 months ago
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- Neural Networks for Protein Sequence Alignment☆131Updated last year
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆50Updated last year
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Multi-task and masked language model-based protein sequence embedding models.☆104Updated 4 years ago
- Install alphafold on the local machine, get out of docker.☆104Updated 4 years ago
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆85Updated last year
- ☆109Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆104Updated 2 weeks ago
- Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learni…☆34Updated 4 years ago
- Protein language model trained on coding DNA☆51Updated last year
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆166Updated 6 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆82Updated last year
- ☆110Updated 3 years ago
- Neural networks for deep mutational scanning data☆70Updated 5 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Fast protein structure searching or your money back☆115Updated last month
- Repository for publicly available deep learning models developed in Rosetta community☆120Updated 4 years ago
- ☆59Updated 2 years ago
- Repository for mRNA Paper and CodonBERT publication.☆134Updated last year
- ☆82Updated 2 years ago
- PSIPRED Protein Secondary Structure Predictor☆58Updated 4 months ago
- Predict the structure of immune receptor proteins☆57Updated last year
- iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of auto…☆119Updated last year
- Geometric deep learning of protein–DNA binding specificity☆76Updated 7 months ago
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆103Updated last month