dhesin / RNABERT-2Links
☆13Updated 2 years ago
Alternatives and similar repositories for RNABERT-2
Users that are interested in RNABERT-2 are comparing it to the libraries listed below
Sorting:
- ☆81Updated 5 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆99Updated 3 months ago
- ☆23Updated last year
- Protein language model trained on coding DNA☆51Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆51Updated last year
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆74Updated 2 years ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆68Updated this week
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆105Updated 2 weeks ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆33Updated 4 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆80Updated 9 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 8 months ago
- RNA Multiple Sequence Alignment☆46Updated 2 years ago
- ☆18Updated 8 months ago
- LoRA for protein language models☆45Updated last year
- ☆110Updated 3 years ago
- Efficient implementatin of ESM family.☆76Updated 2 months ago
- Scalable Deep Learning for RNA Secondary Structure Prediction☆39Updated last month
- ☆109Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- RiboNucleic Acid (RNA) Language Model☆137Updated last month
- ☆73Updated 5 years ago
- ☆26Updated last year
- Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge☆45Updated last year
- ☆47Updated last year
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆78Updated 6 months ago
- ☆50Updated 2 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆49Updated 2 weeks ago
- ☆38Updated 2 years ago
- ☆71Updated 4 years ago