dhesin / RNABERT-2Links
☆13Updated 3 years ago
Alternatives and similar repositories for RNABERT-2
Users that are interested in RNABERT-2 are comparing it to the libraries listed below
Sorting:
- ☆83Updated 6 months ago
- ☆23Updated last year
- Scalable Deep Learning for RNA Secondary Structure Prediction☆39Updated 2 months ago
- Protein language model trained on coding DNA☆52Updated last year
- LoRA for protein language models☆45Updated last year
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆35Updated 5 months ago
- This is the official repository of Prot2Token paper.☆38Updated 6 months ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆51Updated last year
- The first large protein language model trained follows structure instructions.☆89Updated 6 months ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆69Updated this week
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆43Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆60Updated 3 weeks ago
- ☆15Updated 10 months ago
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆107Updated 4 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆78Updated 6 months ago
- ☆108Updated 2 years ago
- ☆72Updated last year
- ☆73Updated 5 years ago
- ☆36Updated 11 months ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆67Updated last year
- ☆50Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆106Updated last week
- ☆38Updated 2 years ago
- ☆54Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆86Updated last year
- Code for "Protein Docking Model Evaluation by Graph Neural Networks"☆59Updated 2 years ago
- MSA Transformer reproduction code☆87Updated 4 years ago