dhesin / RNABERT-2Links
☆13Updated 3 years ago
Alternatives and similar repositories for RNABERT-2
Users that are interested in RNABERT-2 are comparing it to the libraries listed below
Sorting:
- ☆84Updated 7 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- LoRA for protein language models☆47Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆51Updated last year
- ☆23Updated last year
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Protein language model trained on coding DNA☆52Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆61Updated last month
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆85Updated 11 months ago
- PLM based active learning model for protein engineering☆84Updated last year
- An evolutionary context-integrated deep learning framework for protein engineering☆66Updated 3 years ago
- Efficient implementatin of ESM family.☆78Updated 4 months ago
- MSA Transformer reproduction code☆88Updated 4 years ago
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆44Updated last year
- ☆73Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆106Updated this week
- Fast deep learning methods for large-scale protein-protein interaction screening☆113Updated 5 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆88Updated last year
- ☆109Updated 2 years ago
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆67Updated last year
- ☆21Updated last year
- ☆74Updated 5 years ago
- Official implementation of "Learning the language of protein structures"☆41Updated 6 months ago
- ☆50Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆74Updated 2 weeks ago
- Generative Language Modeling for Antibody Design☆177Updated last year
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆35Updated last month
- This is the official repository of Prot2Token paper.☆38Updated 7 months ago
- ☆16Updated 10 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆80Updated 7 months ago