dhesin / RNABERT-2Links
☆13Updated 2 years ago
Alternatives and similar repositories for RNABERT-2
Users that are interested in RNABERT-2 are comparing it to the libraries listed below
Sorting:
- ☆79Updated 3 months ago
- Protein language model trained on coding DNA☆49Updated 10 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- LoRA for protein language models☆41Updated last year
- ☆66Updated 10 months ago
- ☆107Updated last year
- ☆21Updated last year
- Scalable Deep Learning for RNA Secondary Structure Prediction☆37Updated last year
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆103Updated 3 weeks ago
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆51Updated 9 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated last year
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆69Updated 2 months ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆65Updated last year
- MSA Transformer reproduction code☆84Updated 3 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆117Updated 5 months ago
- ☆75Updated 2 years ago
- ☆15Updated 6 months ago
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated last month
- Repository for mRNA Paper and CodonBERT publication.☆134Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆58Updated 8 months ago
- RNA Multiple Sequence Alignment☆43Updated 2 years ago
- Efficient implementatin of ESM family.☆69Updated 2 weeks ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆51Updated last month
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆20Updated 11 months ago
- ☆69Updated 4 months ago
- ☆35Updated 2 years ago
- Primary RNA sequence model☆38Updated last year
- ☆44Updated 11 months ago
- DeepAAI☆33Updated 8 months ago
- ☆36Updated 7 months ago