ky66 / ROBIN
An analysis of a new experimentally-derived nucleic acid binding chemical library
☆21Updated 2 years ago
Alternatives and similar repositories for ROBIN:
Users that are interested in ROBIN are comparing it to the libraries listed below
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆32Updated 10 months ago
- A surface-based deep learning approach for the prediction of ligand binding sites on proteins☆40Updated last year
- ☆31Updated last year
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated last year
- ☆31Updated 11 months ago
- A repository of compound-target annotations in support of Systematic Chemogenetic Library Assembly☆17Updated 4 years ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆20Updated 8 months ago
- a deep learning architecture for RNA-ligand binding sites prediction☆18Updated last year
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆32Updated 3 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆43Updated 3 months ago
- dMaSIF implementation for google colab☆31Updated 2 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆41Updated 2 years ago
- ☆68Updated 4 years ago
- Kinase–drug binding prediction with calibrated uncertainty quantification☆23Updated last year
- ☆48Updated last year
- ☆33Updated 6 months ago
- This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools☆14Updated 4 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆28Updated 3 weeks ago
- Fast and accurate molecular docking with an AI pose scoring function☆37Updated last year
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆28Updated 7 months ago
- An antibody-specific language model focusing on NGL prediction☆26Updated 7 months ago
- Efficient implementatin of ESM family.☆54Updated 2 months ago
- Repo contains source code of the SurfaceID paper☆21Updated last year
- GCN implementation for RNA-small molecule binding prediction. (https://academic.oup.com/nar/article/48/14/7690/5870337)☆16Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆30Updated last month
- A Python 3 version of the protein descriptor package propy☆41Updated 2 years ago
- PyPEF – Pythonic Protein Engineering Framework☆24Updated 3 months ago
- Python package to atom map, correct and suggest enzymatic reactions☆36Updated 11 months ago