Alternatives and similar repositories for ROBIN:

Users that are interested in ROBIN are comparing it to the libraries listed below

• charlesxu90 / helm-gpt
  HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer
  ☆19Updated 6 months ago
• NasimAbdollahi / NodeCoder
  NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.
  ☆32Updated 8 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆26Updated last year
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆35Updated 9 months ago
• KailiWang1 / RLBind
  a deep learning architecture for RNA-ligand binding sites prediction
  ☆18Updated 11 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆32Updated 4 months ago
• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆25Updated 2 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated 9 months ago
• leeyang / DRfold
  ☆33Updated last year
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆26Updated 11 months ago
• Rocklin-Lab / cdna-display-proteolysis-pipeline
  ☆21Updated last year
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆23Updated 4 months ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆24Updated 3 months ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆22Updated last month
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆29Updated last year
• ddd9898 / DeepNano
  Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.
  ☆25Updated 3 weeks ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆45Updated 3 weeks ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆27Updated 7 months ago
• cgoliver / rnamigos2
  Rapid structure-based virtual screening for RNA targets.
  ☆10Updated 2 months ago
• cgoliver / RNAmigos
  GCN implementation for RNA-small molecule binding prediction. (https://academic.oup.com/nar/article/48/14/7690/5870337)
  ☆16Updated last year
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆53Updated this week
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆29Updated last year
• jsunn-y / CARE
  CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes
  ☆29Updated last week
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆39Updated last year
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆28Updated last month
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆39Updated last month
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆30Updated 2 months ago
• PickyBinders / PickyBinder
  Docking Tool Benchmarking Workflow
  ☆21Updated 6 months ago
• molecularmodelinglab / plantain
  Fast and accurate molecular docking with an AI pose scoring function
  ☆37Updated 11 months ago