EnbinYang / GCNfoldLinks
GCNfold: A novel lightweight model with valid extractors for RNA secondary structure prediction
☆14Updated 2 years ago
Alternatives and similar repositories for GCNfold
Users that are interested in GCNfold are comparing it to the libraries listed below
Sorting:
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆65Updated last year
- RiboNucleic Acid (RNA) Language Model☆123Updated 3 months ago
- RNA Multiple Sequence Alignment☆44Updated 2 years ago
- Protein language model trained on coding DNA☆49Updated 10 months ago
- ☆69Updated 4 months ago
- ☆68Updated 11 months ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 5 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆32Updated 3 months ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆22Updated last year
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆18Updated last year
- open source code for Tencent tFold☆110Updated 5 months ago
- ☆44Updated 11 months ago
- ☆73Updated 11 months ago
- ☆107Updated last year
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆79Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆58Updated 8 months ago
- ☆80Updated last year
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated 2 months ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆50Updated 10 months ago
- A generalized enzyme kinetics parameter prediction model.☆58Updated 2 months ago
- Code of a structure-enhanced RNA language model named ERNIE-RNA☆21Updated 2 months ago
- ☆90Updated 10 months ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆69Updated 2 months ago
- ☆36Updated last year
- ☆113Updated last year
- ☆14Updated last year
- MSA Transformer reproduction code☆84Updated 3 years ago
- Unconstrained lattice antibody-antigen bindings generator☆110Updated last year
- Multi-task and masked language model-based protein sequence embedding models.☆102Updated 4 years ago
- ☆36Updated 2 years ago