kkyamada / bert-rbpLinks
☆29Updated 3 years ago
Alternatives and similar repositories for bert-rbp
Users that are interested in bert-rbp are comparing it to the libraries listed below
Sorting:
- ☆57Updated 2 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆189Updated last year
- ☆92Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆86Updated last year
- ☆85Updated 2 years ago
- Neural Networks for Protein Sequence Alignment☆134Updated last year
- Multi-task and masked language model-based protein sequence embedding models.☆104Updated 4 years ago
- Protein language model trained on coding DNA☆53Updated last year
- ☆77Updated 8 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆60Updated last month
- Large language modeling applied to T-cell receptor (TCR) sequences.☆57Updated 3 years ago
- RiboNucleic Acid (RNA) Language Model☆148Updated 3 months ago
- Repository for mRNA Paper and CodonBERT publication.☆141Updated last year
- De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments☆111Updated last month
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆107Updated 7 months ago
- ☆76Updated last year
- Primary RNA sequence model☆41Updated last year
- Genomic language model predicts protein co-regulation and function☆85Updated 9 months ago
- MaveDB API☆15Updated last week
- Geometric deep learning of protein–DNA binding specificity☆77Updated 9 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆106Updated last week
- AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…☆104Updated 2 weeks ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆56Updated last year
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆154Updated last week
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆42Updated last year
- ☆52Updated 2 years ago
- ☆97Updated 7 months ago
- ☆22Updated 3 years ago
- iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of auto…☆121Updated last year
- CodonTransformer (1M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression☆191Updated 5 months ago