linnarsson-lab / BackSPINLinks
Biclustering algorithm
☆57Updated 7 years ago
Alternatives and similar repositories for BackSPIN
Users that are interested in BackSPIN are comparing it to the libraries listed below
Sorting:
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆45Updated 9 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- ☆48Updated 7 years ago
- Multi-sample Unified Discriminant ANalysis☆74Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 6 years ago
- ☆22Updated 5 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- Big data Regression for predicting DNase I hypersensitivity☆30Updated last year
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- Scasat is a single cell ATAC-seq preprocessing and analysis pipeline☆35Updated 6 years ago
- Code for the MNN manuscript figures☆50Updated 7 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- ☆69Updated 7 years ago
- ☆58Updated last year
- ☆37Updated 9 years ago
- ☆43Updated 4 years ago
- ☆55Updated 7 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆75Updated 2 years ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 6 years ago
- GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index☆35Updated 7 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆42Updated 4 years ago
- ☆63Updated 5 years ago
- Single-cell RNA-seq Gene Expression Recovery☆111Updated 10 months ago
- ☆17Updated 6 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago