MarioniLab / geneBasisRLinks
R package for gene selection using k-NN graphs.
☆13Updated last year
Alternatives and similar repositories for geneBasisR
Users that are interested in geneBasisR are comparing it to the libraries listed below
Sorting:
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- scover☆23Updated last year
- ☆29Updated 2 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- ☆12Updated 5 years ago
- scVI extension for unspliced RNA☆16Updated 2 weeks ago
- Comprehensive pipeline for donor demultiplexing in single cell☆24Updated this week
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- post-clustering differential expression test☆35Updated 6 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- scID☆13Updated 3 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆22Updated 9 months ago
- Analyzing chromatin accessibility data in R☆18Updated last year
- ☆12Updated last year
- COMUNET: a tool to explore and visualize intercellular communication☆12Updated 5 years ago
- ☆12Updated 4 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- Heterogeneity Induced Pre-Processing tOol☆18Updated 3 years ago
- Calculation of distance metrics for matrices☆25Updated 6 years ago
- kallisto index tag extractor☆20Updated 5 years ago
- ☆17Updated 2 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Exon-Intron Split Analysis (EISA) in R☆16Updated last month
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- Cell type purification by single-cell transcriptome-trained sorting☆14Updated 5 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Single-cell Mutual Information-based Network Engineering Ranger☆17Updated this week