bioFAM / slalomLinks
☆29Updated 2 years ago
Alternatives and similar repositories for slalom
Users that are interested in slalom are comparing it to the libraries listed below
Sorting:
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆60Updated 3 years ago
- ☆28Updated 6 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 7 years ago
- scRNAseq integration with triplet neural networks☆41Updated 3 years ago
- Single-cell Hierarchical Poisson Factorization☆74Updated 3 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆44Updated last year
- easy access to benchmark datasets☆50Updated 7 years ago
- ☆38Updated this week
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- Population balance analysis☆44Updated 6 years ago
- Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data☆36Updated 5 years ago
- Multi-study integration of cellular trajectories☆19Updated 5 years ago
- consistent quantification of external RNA-seq data sets☆58Updated 2 years ago
- Fast motif matching in R☆46Updated last year
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆22Updated 6 years ago
- Dimensionality reduction for single cell RNA-seq data☆36Updated 5 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- ☆55Updated 11 months ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 7 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Quasilinear data representations for single-cell omics data analysis☆43Updated 2 years ago
- Multi-sample Unified Discriminant ANalysis☆74Updated 2 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 6 years ago
- Multi-omics studies are available here☆52Updated 3 years ago
- Regulatory networks with Direct Information in python☆40Updated 2 years ago
- Inference of switch-like differential expression along single-cell trajectories☆22Updated 8 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆46Updated 9 years ago