bioFAM / slalomLinks
☆29Updated 2 years ago
Alternatives and similar repositories for slalom
Users that are interested in slalom are comparing it to the libraries listed below
Sorting:
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- ☆28Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 10 months ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 5 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- Fast motif matching in R☆47Updated last year
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- post-clustering differential expression test☆35Updated 6 years ago
- scRNAseq integration with triplet neural networks☆40Updated 2 years ago
- ☆37Updated 8 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 9 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- Clustering cells from single cell RNA seq assays☆46Updated 6 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- Data and analysis for the Splatter paper☆29Updated 7 years ago
- ☆53Updated 3 months ago
- ☆16Updated 6 years ago
- Population balance analysis☆44Updated 6 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- ☆20Updated 5 years ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 9 months ago
- ☆35Updated 2 months ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 6 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆42Updated 4 years ago
- ☆41Updated 4 years ago
- Single-cell Hierarchical Poisson Factorization☆70Updated 2 years ago
- GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index☆36Updated 6 years ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆40Updated 3 years ago