bioFAM / slalom
☆28Updated 2 years ago
Alternatives and similar repositories for slalom:
Users that are interested in slalom are comparing it to the libraries listed below
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- ☆28Updated 6 years ago
- ☆37Updated 8 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 5 years ago
- post-clustering differential expression test☆35Updated 5 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆42Updated 8 months ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- ☆16Updated 6 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 5 years ago
- Fast motif matching in R☆46Updated last year
- Population balance analysis☆44Updated 5 years ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- Data and analysis for the Splatter paper☆29Updated 7 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- scRNAseq integration with triplet neural networks☆40Updated 2 years ago
- GiniClust: Detecting Rare Cell Types from Single-Cell Gene Expression Data with Gini Index☆36Updated 6 years ago
- Modelling DNA methylation profiles☆22Updated 4 years ago
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 4 years ago
- Marker Selection by matching manifolds and elastic net☆23Updated 5 months ago
- ☆19Updated 7 years ago
- Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data☆32Updated 4 years ago
- ☆23Updated 5 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- Single-cell Hierarchical Poisson Factorization☆68Updated 2 years ago
- ☆53Updated last month
- Assembles a graph manifold from time series single-cell RNAseq data☆17Updated 3 years ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 6 months ago