Documents used for workshops on single cell analysis
☆27Feb 5, 2017Updated 9 years ago
Alternatives and similar repositories for single_cell_analysis
Users that are interested in single_cell_analysis are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Introduction to single-cell RNA-Seq analysis workshop☆15Feb 1, 2017Updated 9 years ago
- ☆11Jun 23, 2017Updated 8 years ago
- Platform for Interactive analysis and Visualization Of Transcriptomics data☆26Jun 9, 2020Updated 5 years ago
- Clustering cells from single cell RNA seq assays☆46Nov 19, 2018Updated 7 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆97Nov 24, 2020Updated 5 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Feb 20, 2018Updated 8 years ago
- Batch effects and the effective design of single-cell gene expression studies☆105Jul 23, 2019Updated 6 years ago
- Course material in notebook format for learning about single cell bioinformatics methods☆101Jun 19, 2016Updated 9 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- R package for bcbio single-cell RNA-seq analysis.☆30Sep 9, 2024Updated last year
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Apr 14, 2019Updated 6 years ago
- miscellaneous script-like stuff in go for bioinformatics☆14Nov 4, 2016Updated 9 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆37Jun 15, 2018Updated 7 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆88Dec 4, 2025Updated 3 months ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- ☆15Jun 11, 2019Updated 6 years ago
- R package for analysis of single-cell data using graphs☆10Jun 8, 2023Updated 2 years ago
- Scripts for data and figure generation in SAVER paper☆18Jan 5, 2021Updated 5 years ago
- A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis☆27Aug 7, 2025Updated 7 months ago
- ☆15Jan 16, 2024Updated 2 years ago
- This is a web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on …☆14Sep 24, 2019Updated 6 years ago
- Scripts to reproduce analyses of tradeSeq paper.☆16Feb 5, 2020Updated 6 years ago
- R package for robust clustering of single cell RNA sequencing data☆40Jul 10, 2023Updated 2 years ago
- ☆23Jul 31, 2018Updated 7 years ago
- Pipelines for NGS data preprocessing by the Bock lab and friends☆22Aug 29, 2022Updated 3 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆41Updated this week
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Aug 1, 2023Updated 2 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48May 23, 2020Updated 5 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆16Jun 28, 2025Updated 8 months ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Jul 5, 2019Updated 6 years ago
- ☆14Oct 3, 2017Updated 8 years ago
- R package for analyzing single-cell RNA-seq data☆179Feb 29, 2024Updated 2 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Aug 4, 2017Updated 8 years ago
- ☆12Jul 13, 2018Updated 7 years ago
- ☆22Feb 7, 2020Updated 6 years ago
- Evaluation of Cell Type Annotation R Packages on Single Cell RNA-seq Data☆30Feb 20, 2024Updated 2 years ago
- Public repository for building and analyzing protein complex maps☆12Dec 6, 2016Updated 9 years ago
- ESTIMATE tumor infiltration, the tidy way☆17Aug 22, 2023Updated 2 years ago
- Reproducible Workflows, curated at the Fred Hutch☆12Jan 21, 2026Updated 2 months ago