JEFworks / MUDANLinks
Multi-sample Unified Discriminant ANalysis
☆74Updated 2 years ago
Alternatives and similar repositories for MUDAN
Users that are interested in MUDAN are comparing it to the libraries listed below
Sorting:
- ☆59Updated last year
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 5 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated last month
- An R toolkit for estimation of cell composition from bulk expression data☆81Updated 7 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆55Updated 4 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆75Updated 2 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆46Updated 9 years ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆57Updated 2 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- Clone of the Bioconductor repository for the scran package.☆46Updated last year
- supporting code for the multinomial single cell RNA-Seq paper☆53Updated 5 years ago
- ☆55Updated 5 years ago
- ☆55Updated 10 months ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆58Updated 4 years ago
- An R-based interface for loom files☆67Updated 5 years ago
- R package for robust clustering of single cell RNA sequencing data☆39Updated 2 years ago
- ☆69Updated 7 years ago
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Updated 3 years ago
- Normalize CITEseq Data☆66Updated 2 months ago
- epigenome analysis to rank transcription factors☆31Updated 2 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 6 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆46Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆44Updated 3 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- ☆37Updated 9 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆43Updated 8 years ago
- Clone identification from single-cell data☆61Updated 3 years ago
- ☆43Updated 5 years ago