StoreyLab / superSeqLinks
Assessing the increase in power from increasing read depth in a given RNA-Seq study
☆13Updated 6 years ago
Alternatives and similar repositories for superSeq
Users that are interested in superSeq are comparing it to the libraries listed below
Sorting:
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 7 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 4 months ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 4 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆30Updated 3 months ago
- R package for benchmarking single cell analysis methods☆32Updated last year
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Explore design matrices interactively with R/Shiny☆37Updated 4 months ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 4 years ago
- ☆20Updated last month
- Gene-level general linear mixed model☆22Updated 7 months ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated 8 months ago
- countsimQC - Compare characteristic features of count data sets☆28Updated last month
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- Clone of the Bioconductor repository for the basilisk package.☆28Updated 3 months ago
- ☆29Updated last year
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- ☆10Updated 6 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated last week
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated 2 years ago
- The blog of tidyomics☆14Updated last month
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 3 months ago
- ☆11Updated last year
- distinct: a method for differential analyses via hierarchical permutation tests☆11Updated last year
- Brings SummarizedExperiment to the tidyverse☆26Updated last month