StoreyLab / superSeqLinks
Assessing the increase in power from increasing read depth in a given RNA-Seq study
☆13Updated 6 years ago
Alternatives and similar repositories for superSeq
Users that are interested in superSeq are comparing it to the libraries listed below
Sorting:
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 8 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 2 months ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 2 months ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- An R package for multi-dimensional pathway enrichment analysis☆17Updated 3 weeks ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- countsimQC - Compare characteristic features of count data sets☆30Updated 3 months ago
- Integrating zingeR with ZINB-WaVE weights☆26Updated 7 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆28Updated last year
- The blog of tidyomics☆14Updated 6 months ago
- Gene-level general linear mixed model☆24Updated 4 months ago
- Clone of the Bioconductor repository for the basilisk package.☆29Updated 2 months ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 6 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 5 years ago
- Explore design matrices interactively with R/Shiny☆38Updated 3 months ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 2 months ago
- Bioconductor components for general cancer genomics☆11Updated 3 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 5 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 8 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Updated 4 months ago
- Interactive benchmarking of ranking and assignment methods☆16Updated last month
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- ☆20Updated 3 months ago
- BioC2020: Where Software and Biology Connect☆12Updated 2 years ago
- TOP results by CONfident efFECT Sizes.☆15Updated last year