AllonKleinLab / PBALinks
Population balance analysis
☆44Updated 6 years ago
Alternatives and similar repositories for PBA
Users that are interested in PBA are comparing it to the libraries listed below
Sorting:
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- Geometry-preserving random sampling☆89Updated 10 months ago
- scNMT-seq gastrulation☆42Updated 2 years ago
- Transcriptional burst kinetics inference and analysis described in the article "Genomic encoding of transcriptional burst kinetics" (Lars…☆39Updated last year
- This is the code release for paper Continuous State HMMs for Modeling Time Series Single Cell RNA-Seq Data☆22Updated 7 years ago
- SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation☆45Updated 5 years ago
- ☆35Updated 6 months ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆51Updated last year
- ☆28Updated 6 years ago
- Filtering of Poison noise on a single-cell RNA-seq UMI count matrix☆78Updated 4 months ago
- Quasilinear data representations for single-cell omics data analysis☆42Updated 2 years ago
- ☆43Updated last year
- Reconstruct the lineage topology of a scRNA-seq differentiation dataset.☆18Updated 5 years ago
- A method for analyzing scATAC-seq experiments.☆34Updated 2 months ago
- ☆58Updated last year
- ☆55Updated 7 months ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆54Updated last year
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- Discrete Distributional Differential Expression☆22Updated 6 years ago
- Multi-sample Unified Discriminant ANalysis☆74Updated 2 years ago
- ☆34Updated 6 years ago
- Clone identification from single-cell data☆61Updated 2 years ago
- R toolbox for Archetypal Analysis and Pareto Task Inference on single cell data (based on ParTI)☆33Updated 5 years ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated 3 weeks ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- Task-based gene regulatory network inference using single-cell or bulk gene expression data conditioned on a prior network.☆53Updated last year
- Single-cell Hierarchical Poisson Factorization☆73Updated 3 years ago