Mapping pipeline for snmC-seq based technologies.
☆20Sep 25, 2023Updated 2 years ago
Alternatives and similar repositories for cemba_data
Users that are interested in cemba_data are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Toolkit for single-cell DNA methylation analysis.☆50May 25, 2026Updated 3 months ago
- ☆73Nov 21, 2025Updated 9 months ago
- ☆27Apr 15, 2025Updated last year
- SingleCellFusion--a tool to integrate single-cell transcriptome and epigenome data☆13Mar 13, 2022Updated 4 years ago
- SnapHiC: Single Nucleus Analysis Pipeline for Hi-C Data☆42Jul 6, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆30Sep 9, 2021Updated 4 years ago
- ☆78May 27, 2026Updated 3 months ago
- Analysis of Paired-Tag datasets☆44Jan 19, 2024Updated 2 years ago
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, hypergraph☆96Oct 29, 2025Updated 10 months ago
- ☆30Jul 25, 2024Updated 2 years ago
- ☆12Oct 4, 2021Updated 4 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- Whole mouse brain snATAC seq analysis☆29Apr 18, 2025Updated last year
- ☆15Mar 15, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- single-cell Hi-C, scHi-C, Hi-C, 3D genome, nuclear organization, genome subcompartment☆21Apr 8, 2024Updated 2 years ago
- Analysis pipeline used to benchmark scRNA-seq copy number variant callers☆17May 17, 2026Updated 3 months ago
- Code and data sharing of Liu et al. 2023 manuscript☆18Apr 18, 2023Updated 3 years ago
- A spatial genome aligner for analyzing multiplexed DNA-FISH imaging data.☆18Oct 10, 2023Updated 2 years ago
- Inferring cell-cell interactions from pseudotime ordering of scRNA-Seq data☆26Jan 11, 2023Updated 3 years ago
- Tools to analyze Dip-C (or other 3C/Hi-C) data☆79Jun 24, 2026Updated 2 months ago
- Code to go along with Velasco et. al.☆11Jun 5, 2019Updated 7 years ago
- ☆39Sep 5, 2024Updated last year
- ☆19Mar 31, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An "i want hue" color palette generator for R☆27Oct 2, 2017Updated 8 years ago
- pycistarget is a python module to perform motif enrichment analysis in sets of regions with different tools and identify high confidence …☆20Apr 14, 2026Updated 4 months ago
- Single-cell epigenomics analysis tools☆323Aug 15, 2026Updated 2 weeks ago
- ☆10Dec 11, 2024Updated last year
- Gene regulatory network inference for RNA velocity and pseudotime data☆29Nov 6, 2025Updated 9 months ago
- ☆12Nov 9, 2020Updated 5 years ago
- Read level DNA methylation analysis of bisulfite converted sequencing data☆20Feb 23, 2026Updated 6 months ago
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆98Jul 31, 2019Updated 7 years ago
- All-in-one analysis pipeline☆41Sep 3, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Python package with CLI for the analysis of single cell methylation data.☆20Oct 29, 2024Updated last year
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆57Oct 8, 2021Updated 4 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆44Mar 3, 2017Updated 9 years ago
- Multiresolution Tensor Learning☆10Aug 18, 2020Updated 6 years ago
- Cherimoya is a lightweight sequence-to-function (S2F) model that is small, fast, and easy to use. Now usable by agents.☆55Aug 13, 2026Updated 2 weeks ago
- ☆27Mar 31, 2026Updated 4 months ago
- ☆32Jul 7, 2026Updated last month