All-in-one analysis pipeline
☆41Sep 3, 2024Updated last year
Alternatives and similar repositories for Taiji
Users that are interested in Taiji are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Feb 16, 2026Updated 5 months ago
- Code used in article "Uncovering the transcriptional regulatory network involved in boosting wheat regeneration and transformation".☆13Mar 21, 2023Updated 3 years ago
- Haskell numerical ODE solvers☆13Aug 21, 2017Updated 8 years ago
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Oct 20, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆13Nov 29, 2022Updated 3 years ago
- Enhanced Chromatin Occupancy (EChO)☆13Jan 8, 2020Updated 6 years ago
- Cell type matching in single-cell RNA-sequencing data using FR-Match☆22Aug 2, 2026Updated last week
- PHi-C: deciphering Hi-C data into polymer dynamics☆11Aug 12, 2020Updated 5 years ago
- conserved non-coding sequence☆18Feb 21, 2022Updated 4 years ago
- Toolkit for single-cell analysis of chromatin accessibility☆13Feb 27, 2020Updated 6 years ago
- Analysing Capture Seq Count Data☆13Jun 11, 2018Updated 8 years ago
- K-means clustering for large single-cell datasets☆13Feb 10, 2026Updated 6 months ago
- Reusable scripts and functions archive for the paper "Organoid single-cell genomic atlas uncovers human-specific features of brain develo…☆40Aug 2, 2021Updated 5 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Show, plot and compare benchmark results☆16May 14, 2026Updated 2 months ago
- Single Cell Classification using RNA-seq data and Supervised Learning Algorithms☆13May 7, 2016Updated 10 years ago
- Code to reproduce analyses and figures for Kamath et al., 2022☆13May 5, 2022Updated 4 years ago
- Haskell library of data types and calculations for positions on planet Earth☆20Apr 20, 2026Updated 3 months ago
- represent each cell in UMAP plots as a pie chart☆16Sep 27, 2021Updated 4 years ago
- Bead-based single-cell atac processing☆33Jul 6, 2026Updated last month
- A Feature Density Estimator for High-Throughput Sequence Tags☆22May 25, 2021Updated 5 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆13Apr 3, 2025Updated last year
- scRNAseq clustering tool☆11Apr 14, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆252Aug 3, 2026Updated last week
- A categorical framework for circuit construction☆31Sep 27, 2016Updated 9 years ago
- Pure Haskell implementation of SplitMix pseudo-random number generator☆26Apr 17, 2026Updated 3 months ago
- nimfa - A Python Library for Nonnegative Matrix Factorization Techniques☆10Aug 30, 2018Updated 7 years ago
- nucleosome calling using ATAC-seq☆113Dec 20, 2020Updated 5 years ago
- ☆68Jul 13, 2023Updated 3 years ago
- Python Implementation of MetaNeighbor scRNAseq Analysis Method☆11Updated this week
- Mapping pipeline for snmC-seq based technologies.☆20Sep 25, 2023Updated 2 years ago
- Algorithms for single-cell analysis☆29Jul 19, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆16Jun 28, 2024Updated 2 years ago
- Sparse matrix linear equation solver, using the Conjugate Gradient algorithm☆16Sep 5, 2020Updated 5 years ago
- Intervene: a tool for intersection and visualization of multiple genomic region and gene sets☆150Oct 28, 2023Updated 2 years ago
- A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and au…☆59May 5, 2021Updated 5 years ago
- Generate Novel Insights from Gene Correlation Data☆14Jun 27, 2022Updated 4 years ago
- ☆52Sep 21, 2018Updated 7 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆16Jul 28, 2026Updated last week