cxzhu / Paired-Tag

Related projects ⓘ

Alternatives and complementary repositories for Paired-Tag

• QuKunLab / ATAC-pipe
  Analysis pipeline for ATAC-seq Data
  ☆60Updated 3 years ago
• GreenleafLab / 10x-scATAC-2019
  Publication Page for Satpathy*, Granja* et al 2019
  ☆92Updated 4 years ago
• MarioniLab / EmbryoTimecourse2018
  Data and analysis scripts for our Embryo Timecourse paper.
  ☆65Updated 4 years ago
• MGI-tech-bioinformatics / DNBelab_C_Series_HT_scRNA-analysis-software
  An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets
  ☆72Updated last month
• stjude / ROSE
  ROSE: RANK ORDERING OF SUPER-ENHANCERS
  ☆43Updated 3 months ago
• tanlongzhi / dip-c
  Tools to analyze Dip-C (or other 3C/Hi-C) data
  ☆62Updated last week
• marcus-seldin / QENIE
  Correlation-based approach for identification of endocrine interactions
  ☆11Updated 2 years ago
• single-cell-genetics / cellSNP
  Pileup biallelic SNPs from single-cell and bulk RNA-seq data
  ☆75Updated 2 years ago
• bvaldebenitom / SoloTE
  ☆28Updated 5 months ago
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆53Updated 3 years ago
• RegnerM2015 / scENDO_scOVAR_2020
  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…
  ☆34Updated last year
• TheHumphreysLab / plot1cell
  ☆95Updated last year
• KChen-lab / Monopogen
  SNV calling from single cell sequencing
  ☆84Updated last week
• JiekaiLab / scTE
  ☆102Updated 6 months ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆43Updated 4 years ago
• CebolaLab / ATAC-seq
  Analysis pipeline for ATAC-seq data
  ☆38Updated last year
• 3UTR / DaPars2
  Dynamics analysis of Alternative PolyAdenylation from RNA-seq
  ☆50Updated last year
• andygxzeng / BoneMarrowMap
  A single cell RNA-seq reference map of human hematopoietic development in the bone marrow, with balanced representation of hematopoietic …
  ☆24Updated 2 weeks ago
• ren-lab / hic-pipeline
  ☆24Updated 3 years ago
• liulab-dfci / MAGeCK
  Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…
  ☆26Updated 3 years ago
• PierreBSC / Viral-Track
  ☆55Updated 4 years ago
• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆43Updated 4 years ago
• liulab-dfci / RIMA_pipeline
  ☆74Updated 10 months ago
• rpolicastro / scProportionTest
  ☆59Updated last year
• tobiasrausch / ATACseq
  Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
  ☆74Updated last year
• chris-mcginnis-ucsf / MULTI-seq
  R implementation of MULTI-seq sample classification workflow
  ☆61Updated last year
• mdozmorov / scHiC_notes
  Notes on single-cell Hi-C technologies, tools, and data
  ☆71Updated last month
• databio / awesome-atac-analysis
  Links to ATAC-seq analysis tools
  ☆50Updated 3 years ago
• quadbio / scMultiome_analysis_vignette
  Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis
  ☆47Updated 7 months ago
• reskejak / ATAC-seq
  Basic workflow for ATAC-seq analysis
  ☆70Updated 8 months ago