cxzhu / Paired-Tag
Analysis of Paired-Tag datasets
☆39Updated last year
Alternatives and similar repositories for Paired-Tag:
Users that are interested in Paired-Tag are comparing it to the libraries listed below
- Publication Page for Satpathy*, Granja* et al 2019☆92Updated 4 years ago
- Analysis pipeline for ATAC-seq Data☆60Updated 3 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 2 years ago
- mutation(barcode) caller for 10x single cell data☆44Updated 4 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆45Updated 7 months ago
- ☆61Updated last year
- Tools to analyze Dip-C (or other 3C/Hi-C) data☆63Updated 4 months ago
- SNV calling from single cell sequencing☆93Updated 4 months ago
- Functional Inference of Gene Regulation☆41Updated 8 months ago
- Single Cell Analysis of Five'Ends☆48Updated last year
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆74Updated 2 weeks ago
- wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq☆52Updated last week
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 6 years ago
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆84Updated 5 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆57Updated last year
- Links to ATAC-seq analysis tools☆63Updated 3 years ago
- ☆104Updated 2 weeks ago
- ☆30Updated last year
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- Processing pipeline scripts for sci-RNA-seq3 (bash, R, python)☆41Updated 3 years ago
- Analysis pipeline for ATAC-seq data☆48Updated last year
- ☆84Updated 3 years ago
- Tutorial Website☆57Updated 4 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆96Updated last year
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- Repository for Cibersortx☆57Updated 4 years ago
- ☆59Updated 5 years ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆63Updated 3 weeks ago