zhirongbaolab / heoaLinks
☆14Updated 2 years ago
Alternatives and similar repositories for heoa
Users that are interested in heoa are comparing it to the libraries listed below
Sorting:
- Image processing pipeline for spatial projects☆15Updated 2 years ago
- Supporting material for publication: "Ovarian cancer mutational processes drive site-specific immune evasion"☆22Updated 3 months ago
- ☆22Updated 2 years ago
- ☆23Updated 2 years ago
- iterative clustering pipeline of big single cell datasets.☆33Updated 3 months ago
- ☆25Updated last year
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆23Updated 3 months ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 5 months ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆20Updated last year
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆19Updated 4 years ago
- Python package with CLI for the analysis of single cell methylation data. Now known as MethSCAn: https://github.com/anders-biostat/MethSC…☆11Updated last year
- ☆29Updated 5 months ago
- InstaPrism is an R package for fast implementation of BayesPrism☆37Updated last year
- ☆28Updated 3 years ago
- ☆39Updated 4 years ago
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆36Updated last year
- Data processing and analysis scripts for our spatial profiling of embryos using seqFISH☆16Updated 2 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆33Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆37Updated 4 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆29Updated 2 years ago
- ☆19Updated 2 years ago
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆20Updated 3 years ago
- ☆25Updated last week
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 2 years ago
- ☆18Updated 2 years ago
- Regulatory networks with Direct Information☆16Updated 5 years ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆61Updated last year
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆19Updated last year