powellgenomicslab / ascendLinks
Analysis of Single Cell Expression, Normalization and Differential expression
☆12Updated 5 years ago
Alternatives and similar repositories for ascend
Users that are interested in ascend are comparing it to the libraries listed below
Sorting:
- ☆12Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆12Updated 5 years ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated last year
- Bead-based single-cell atac processing☆33Updated 3 years ago
- ☆23Updated 2 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆20Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆12Updated 2 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Tools for assessing clustering robustness☆25Updated this week
- Pairwise Hierarchical Model☆19Updated 3 years ago
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Updated 2 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 2 years ago
- 10x snRNA-seq study on 5 postmortem human brain regions across the reward circuitry: NAc, AMY, sACC, DLPFC, and HPC☆23Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Gene Expression Decomposition and Integration☆18Updated 4 months ago
- ☆41Updated 4 years ago
- ANS_signature_scoring: A gene expression signature scoring Python package.☆16Updated 3 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Landscape Single Cell Entropy☆20Updated 4 years ago
- Analytical tools and pipelines for bulk and single cell epigenomic and human genetic data☆27Updated 4 years ago
- 2019 single cell RNA sequencing Workshop @ UCD AND UCSF☆17Updated 5 years ago
- scover☆23Updated last year
- Calculation of distance metrics for matrices☆25Updated 6 years ago