powellgenomicslab / ascendLinks
Analysis of Single Cell Expression, Normalization and Differential expression
☆12Updated 5 years ago
Alternatives and similar repositories for ascend
Users that are interested in ascend are comparing it to the libraries listed below
Sorting:
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 11 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- Code associated with MIX-seq manuscript☆15Updated 4 years ago
- ☆12Updated 4 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Efficiently compute robust markers across single-cell datasets☆11Updated 4 years ago
- ☆12Updated 5 years ago
- Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)☆29Updated 4 years ago
- ☆12Updated last year
- ☆14Updated 6 years ago
- pipelines to process scRNA-seq data☆12Updated 4 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆25Updated 5 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- ☆23Updated 2 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆23Updated last month
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- ANS_signature_scoring: A gene expression signature scoring Python package.☆15Updated 2 months ago
- ☆29Updated 2 years ago
- GLASS consortium☆13Updated 3 years ago