☆30Sep 29, 2025Updated 7 months ago
Alternatives and similar repositories for MethylTree
Users that are interested in MethylTree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Apr 4, 2023Updated 3 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆31Aug 16, 2021Updated 4 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆33Jan 30, 2026Updated 3 months ago
- Inferring multi-modality dynamics for single cell genomics data☆13Dec 18, 2025Updated 5 months ago
- Multivariate stochastic modeling for transcriptional dynamics with cell-specific latent time using SDEvelo☆21Jan 28, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆14Mar 8, 2024Updated 2 years ago
- Framework for Unified Single-Cell Analysis (FUSCA) is a software package for single-cell data analysis developed in R. At the moment, it …☆22Feb 14, 2023Updated 3 years ago
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆44Oct 10, 2025Updated 7 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Feb 22, 2025Updated last year
- ☆12May 29, 2024Updated last year
- Non-parametric density inference for single-cell analysis.☆74Apr 10, 2026Updated last month
- Camiel's scATAC-seq analysis pipeline☆14Apr 15, 2024Updated 2 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆20May 13, 2026Updated last week
- ☆34Oct 4, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code and data sharing of Liu et al. 2023 manuscript☆17Apr 18, 2023Updated 3 years ago
- ☆16May 25, 2021Updated 5 years ago
- Predict RNA velocity through deep learning☆73Dec 12, 2023Updated 2 years ago
- CellPhy: accurate and fast probabilistic inference of single-cell phylogenies☆20Jan 8, 2026Updated 4 months ago
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆22Apr 16, 2026Updated last month
- ☆13Aug 9, 2022Updated 3 years ago
- A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity (now archived). Pl…☆20May 13, 2026Updated last week
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated last year
- ☆33May 4, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Cell-type Relationship Analysis Workflow Done Across Distances☆41Nov 18, 2025Updated 6 months ago
- ☆11Apr 6, 2022Updated 4 years ago
- Single-cell Mutual Information-based Network Engineering Ranger☆24Aug 28, 2025Updated 8 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆88Aug 10, 2025Updated 9 months ago
- Reworked clustering metrics for assessing performance in imbalanced settings☆18Jun 3, 2024Updated last year
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- Supplementary files and notebooks to recreate figures.☆21Aug 12, 2025Updated 9 months ago
- ☆27May 7, 2026Updated 2 weeks ago
- codes for article☆18Jan 14, 2026Updated 4 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated 2 years ago
- Mapping pipeline for snmC-seq based technologies.☆20Sep 25, 2023Updated 2 years ago
- R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.☆19Apr 29, 2026Updated 3 weeks ago
- ☆15Aug 5, 2022Updated 3 years ago
- Trajectory Inference Based on SNP information.☆24Jun 19, 2024Updated last year
- ☆24Jul 9, 2025Updated 10 months ago
- inferring regulatory cellular dynamics☆112May 13, 2026Updated last week