Single-cell epigenomics analysis tools
☆324Aug 4, 2026Updated last week
Alternatives and similar repositories for SnapATAC2
Users that are interested in SnapATAC2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis Pipeline for Single Cell ATAC-seq☆322Apr 27, 2023Updated 3 years ago
- muon is a multimodal omics Python framework☆278Aug 3, 2026Updated last week
- Adata Viewer: Head/Less/Shape h5ad file in terminal☆12Updated this week
- Universal Single-Cell Genomics Preprocessing package☆51Jul 29, 2026Updated last week
- ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)☆462Feb 18, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tool for semi-automatic cell type classification☆500May 22, 2026Updated 2 months ago
- SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) a…☆262Jan 16, 2026Updated 6 months ago
- ☆39Sep 5, 2024Updated last year
- CellRank: dynamics from multi-view single-cell data☆454Aug 3, 2026Updated last week
- Graph-linked unified embedding for single-cell multi-omics data integration☆474Feb 9, 2026Updated 6 months ago
- This is the alpha version of the CellOracle package☆480Apr 30, 2026Updated 3 months ago
- Paired-seq☆15Jul 17, 2024Updated 2 years ago
- Deep probabilistic analysis of single-cell and spatial omics data☆1,675Updated this week
- Whole mouse brain snATAC seq analysis☆29Apr 18, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Multimodal Data (.h5mu) implementation for Python☆129Updated this week
- Benchmarking computational single cell ATAC-seq methods☆185Nov 30, 2020Updated 5 years ago