Useful small programs
☆26Jan 11, 2013Updated 13 years ago
Alternatives and similar repositories for misc
Users that are interested in misc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Components of genome sequence assembly tools☆21Mar 30, 2022Updated 4 years ago
- ☆13Sep 11, 2025Updated 11 months ago
- de novo sequence assembler using string graphs☆244Aug 8, 2019Updated 7 years ago
- Computes FRC from SAM/BAM file and not from afg files☆17Oct 5, 2018Updated 7 years ago
- Useful FILe and stream Operations☆45Dec 21, 2015Updated 10 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Alignment and Tabulation of BiSulfite Treated Reads☆16Jan 7, 2014Updated 12 years ago
- Bayesian reconstruction of ancient DNA fragments☆31Aug 6, 2024Updated 2 years ago
- ☆12Feb 14, 2023Updated 3 years ago
- Genomic Assemblies Merger for NGS☆26Nov 10, 2023Updated 2 years ago
- ☆16Jan 2, 2024Updated 2 years ago
- This project is deprecated, please see strelka2 at https://github.com/Illumina/strelka☆37Feb 24, 2017Updated 9 years ago
- Experiments for "Scaling read aligners to hundreds of threads on general-purpose processors"☆11Jun 8, 2018Updated 8 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Jun 28, 2018Updated 8 years ago
- Utilities for Samtools ( http://samtools.sourceforge.net/ )☆18Sep 26, 2011Updated 14 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- kmerfreq count K-mer (with size K) frequency from the input sequence data, typically sequencing reads data, and refe rence genome data is…☆20Mar 30, 2020Updated 6 years ago
- Go implementation of ntHash☆20Sep 16, 2021Updated 4 years ago
- vcf file manipulation☆22Jul 9, 2015Updated 11 years ago
- A WGS de novo assembler based on the FMD-index for large genomes☆74Dec 6, 2013Updated 12 years ago
- Accurate read-based metagenome characterization using a hierarchical suite of unique signatures. Please visit our homepage:☆23Jan 29, 2019Updated 7 years ago
- A sequence demultiplexer for the Illumina HiSeq technology☆21Apr 29, 2013Updated 13 years ago
- BioPerl scripts and utilities☆11Sep 2, 2025Updated 11 months ago
- mapDamage: tracking and quantifying damage patterns in ancient DNA sequences☆51Jul 14, 2025Updated last year
- Isaac Genome Alignment Software☆36Apr 7, 2015Updated 11 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Simulate short-reads datasets using probabilistic models☆11Jun 1, 2013Updated 13 years ago
- ☆14Jul 21, 2026Updated last month
- Basic, no assumptions, multi-pileup☆24Mar 26, 2014Updated 12 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Aug 23, 2019Updated 7 years ago
- Flexible genotype query among 30,000+ samples whole-genome☆95Sep 4, 2019Updated 6 years ago
- A terminal UI for monitoring Snakemake workflows☆23Jul 20, 2026Updated last month
- Incremental construction of FM-index for DNA sequences☆72Jun 12, 2024Updated 2 years ago
- ☆10Oct 30, 2018Updated 7 years ago
- ☆13May 27, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 10 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Aug 8, 2024Updated 2 years ago
- mouse_fullStack_annotations☆15Jun 29, 2023Updated 3 years ago
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 3 years ago
- Sweep-line algorithm for genomic features. Detect overlaps on large files w/ minimal memory.☆10Sep 13, 2011Updated 14 years ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆44Nov 18, 2023Updated 2 years ago
- ☆21Dec 26, 2025Updated 8 months ago